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AT3G08910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT5G01390.1); Has 28100 Blast hits to 27785 proteins in 3479 species: Archae - 185; Bacteria - 10426; Metazoa - 4606; Fungi - 2650; Plants - 2881; Viruses - 19; Other Eukaryotes - 7333 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:AC010871EMBL:BT044615
EMBL:CP002686EnsemblPlants:AT3G08910EnsemblPlants:AT3G08910.1entrez:820040
Gene3D:1.10.287.110GeneID:820040GO:GO:0006457Gramene:AT3G08910.1
hmmpanther:PTHR24078hmmpanther:PTHR24078:SF298InterPro:IPR001623InterPro:IPR002939
InterPro:IPR008971InterPro:IPR018253KEGG:ath:AT3G08910KO:K09510
OMA:GEDIFTSPfam:PF00226Pfam:PF01556Pfscan:PS50076
PhylomeDB:Q9SR91PRINTS:PR00625PROSITE:PS00636PROSITE:PS50076
Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571
Reactome:R-ATH-5687128RefSeq:NP_187503.1scanprosite:PS00636SMART:SM00271
SMR:Q9SR91STRING:3702.AT3G08910.1SUPFAM:SSF46565SUPFAM:SSF49493
TAIR:AT3G08910UniGene:At.40199UniProt:Q9SR91
Coordinates (TAIR10) chr3:-:2710402..2711811
Molecular Weight (calculated) 35798.50 Da
IEP (calculated) 9.81
GRAVY (calculated) -0.63
Length 323 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)