AT3G08760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATSIK; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G15080.1); Has 42849 Blast hits to 42385 proteins in 1619 species: Archae - 20; Bacteria - 2695; Metazoa - 11858; Fungi - 1356; Plants - 23776; Viruses - 143; Other Eukaryotes - 3001 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:2658129..2659984 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61065.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.93 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||
| Length | 557 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLGCFPLKS KKKRGSVSMK RLDLEESKPT ALPEPPKIPS RNLQSAPPSF RTRVKPIQSN NGGTGEMSSR ARVMSAPSSI HGAAERDLLA GVYHDEQDEQ 101: PRDPRTSTKE SSPQPLPLPS PRTGSSLKNW GSFKSFNGSS GRLSSSAAVS GPLPLPPSGS VRSFSYDEVM AACNAFSSDR CVMEGLSSVM YMASFGDEAS 201: TSGLKKVDAT VVRLHVITQS IREFINEVNT LASLQHQNLC KLVGYHARDG SDTRMLVYER LALGSLDRLL HGRSDGPPLD WNTRMKIALC AAQGLTFLHE 301: EGPFQAMYNE FSTANIQVDK DFSAKLSGYG CAGHAPETET SNSSALANLS VETLERGLLT PKSNVWSYGI VLLEMLTGRK NMDGSYPKEE RNLVKWSRAF 401: LADDCRLSLI MDPQLKGRFP AKAARSIADI AQKCLQVEPS ERPTMRNIVD QLKIIQDMKY SCRFPLREPA PVVARKHMGR SSSLNTIIWT PASVPPRSSF 501: SPSPPPRRPS VSPTRGRTLV FPPVFPPRAC SSLEEMAREE VRRSSSASGR RTSLEGF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)