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AT3G02980.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.702
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : MEIOTIC CONTROL OF CROSSOVERS1
Curator
Summary (TAIR10)
Encodes MEIOTIC CONTROL OF CROSSOVERS1 (MCC1), a GCN5-related histone N-acetyltransferase. MCC1 appeared to be required in meiosis for normal chiasma number and distribution and for chromosome segregation. Activation tagging line has increased level of histone H3 acetylation.
Computational
Description (TAIR10)
MEIOTIC CONTROL OF CROSSOVERS1 (MCC1); FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: meiosis, histone H3 acetylation, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT5G16800.2); Has 652 Blast hits to 648 proteins in 194 species: Archae - 48; Bacteria - 59; Metazoa - 253; Fungi - 42; Plants - 110; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.48eggNOG:ENOG410IQK0eggNOG:ENOG410Y94AEMBL:AC018363
EMBL:CP002686EMBL:EU598461EnsemblPlants:AT3G02980EnsemblPlants:AT3G02980.1
entrez:821166Gene3D:3.40.630.30GeneID:821166Genevisible:Q9M8T9
GO:GO:0004402GO:GO:0007059GO:GO:0007126GO:GO:0043966
Gramene:AT3G02980.1hmmpanther:PTHR14744hmmpanther:PTHR14744:SF15HOGENOM:HOG000239379
InParanoid:Q9M8T9InterPro:IPR000182InterPro:IPR016181KEGG:ath:AT3G02980
OMA:EVAMFVVPaxDb:Q9M8T9Pfam:PF00583Pfam:Q9M8T9
Pfscan:PS51186PhylomeDB:Q9M8T9PRIDE:Q9M8T9PRO:PR:Q9M8T9
PROSITE:PS51186ProteinModelPortal:Q9M8T9Proteomes:UP000006548RefSeq:NP_186948.1
SMR:Q9M8T9STRING:3702.AT3G02980.1SUPFAM:SSF55729TAIR:AT3G02980
tair10-symbols:MCC1UniGene:At.50149UniProt:Q9M8T9
Coordinates (TAIR10) chr3:-:670897..672215
Molecular Weight (calculated) 28307.10 Da
IEP (calculated) 7.23
GRAVY (calculated) -0.03
Length 247 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRFPRRFID DSSMEDAGIS LCPSIHYRPI NPNDLDRLEQ IHRDIFPIKY ESEFFQSVVN GVDIVSWAAV DRSRPDDHSD ELIGFVTAKF VLAKDSEIDD
101: LIHYDSSKGE ETLIYILTLG VVETYRNRGI AMSLISEVIK YASGLSVCRG VYLHVIAHNN AAICLYKRLM FRCVRRLHGF YLINRHHFDA FLFVYFINGS
201: RTPCSPLEVA MFVVNYMKSG IKSVASKLAN KDEKGLKWLF CKDTDCV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)