suba logo
AT3G02800.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.535
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Tyrosine phosphatase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Tyrosine phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic (InterPro:IPR020428), Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G16480.1); Has 721 Blast hits to 711 proteins in 161 species: Archae - 0; Bacteria - 73; Metazoa - 5; Fungi - 358; Plants - 145; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G02800-MONOMEReggNOG:COG2365eggNOG:KOG1572EMBL:AK175475
EMBL:CP002686EnsemblPlants:AT3G02800EnsemblPlants:AT3G02800.1entrez:821239
Gene3D:3.90.190.10GeneID:821239GO:GO:0004725GO:GO:0005634
GO:GO:0005737GO:GO:0016791Gramene:AT3G02800.1hmmpanther:PTHR31126
hmmpanther:PTHR31126:SF19HOGENOM:HOG000188365InterPro:IPR004861InterPro:IPR016130
InterPro:IPR020428InterPro:IPR029021KEGG:ath:AT3G02800KO:K18045
OMA:QGYGSNKPfam:PF03162PhylomeDB:Q681Z2PRINTS:PR01911
PROSITE:PS00383Proteomes:UP000006548RefSeq:NP_186929.2scanprosite:PS00383
SMR:Q681Z2STRING:3702.AT3G02800.1SUPFAM:SSF52799TAIR:AT3G02800
UniGene:At.41076UniProt:Q681Z2
Coordinates (TAIR10) chr3:-:606638..607704
Molecular Weight (calculated) 23511.60 Da
IEP (calculated) 8.47
GRAVY (calculated) -0.39
Length 203 amino acids
Sequence (TAIR10)
(BLAST)
001: MCLIMETDDH NGDVLAPPSN FSMVEDGIYR SGFPRPENFS FLKTLNLRSI IYLCPEPYPE ENLKFLEANN IKLYQFGIEG KTDPPTPMPK DTVLDALKVL
101: VDVRNHPILI HCKRGKHRTG CLVGCLRKVQ SWCLSSVLEE YQKNAGLKWR QRDLNFIEAF DIVSLRQCLL SIMYQYHGYG FKRRRLAYEE ENVKTPKPQA
201: ARV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)