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AT3G02510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Regulator of chromosome condensation (RCC1) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Regulator of chromosome condensation (RCC1) family protein; FUNCTIONS IN: chromatin binding, Ran GTPase binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT5G16040.1); Has 23677 Blast hits to 6532 proteins in 503 species: Archae - 101; Bacteria - 3224; Metazoa - 7700; Fungi - 1627; Plants - 3082; Viruses - 4; Other Eukaryotes - 7939 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5184eggNOG:KOG1426EMBL:AK227929EMBL:CP002686
EnsemblPlants:AT3G02510EnsemblPlants:AT3G02510.1entrez:821100ExpressionAtlas:Q0WSJ9
Gene3D:2.130.10.30GeneID:821100Gramene:AT3G02510.1hmmpanther:PTHR22870
hmmpanther:PTHR22870:SF206InterPro:IPR000408InterPro:IPR009091OMA:WACVVEA
Pfam:PF00415Pfscan:PS50012PhylomeDB:Q0WSJ9PRINTS:PR00633
PROSITE:PS00626PROSITE:PS50012Proteomes:UP000006548RefSeq:NP_186900.3
scanprosite:PS00626SMR:Q0WSJ9STRING:3702.AT3G02510.1SUPFAM:SSF50985
TAIR:AT3G02510UniGene:At.20016UniGene:At.41128UniGene:At.70614
UniProt:Q0WSJ9
Coordinates (TAIR10) chr3:-:522086..524536
Molecular Weight (calculated) 42503.00 Da
IEP (calculated) 5.77
GRAVY (calculated) -0.42
Length 393 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTATSIIAW GSGEDGQLGI GTNEEKEWAC VVEALEPYSV RSVVSGSRNS LAICDDGTMF TWGWNQRGTL GHQPETKTEN IPSRVKALAN VKITQAAIGG
101: WHCLAVDDQG RAYAWGGNEY GQCGEEPLKD EMGRPVRRDI VIPKRCAPKL TVRQVAAGGT HSVVLTREGH VWTWGQPWPP GDIKQISVPV RVQGLENVRL
201: IAVGAFHNLA LEEDGRLLAW GNNEYGQLGT GDTQPTSHPV PVQGLDDLTL VDIAAGGWHS TALTDKGEVY GWGRGEHGRL GLGDNDKSSK MVPQKVNLLA
301: EEDIIQVSCG GTHSVALTRD GRIFSFGRGD HGRLGYGRKV TTGQPLELPI KIPPPEGSFN HTDEEEEGKW SAKSIACGGR HTLAIVEWKS DDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)