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AT2G46620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.826
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28580.1); Has 14567 Blast hits to 13858 proteins in 2196 species: Archae - 1075; Bacteria - 5270; Metazoa - 1990; Fungi - 1931; Plants - 1602; Viruses - 18; Other Eukaryotes - 2681 (source: NCBI BLink).
Protein Annotations
EC:3.6.1.3eggNOG:COG0465eggNOG:KOG0743EMBL:AC006418
EMBL:AY075646EMBL:AY143966EMBL:CP002685EnsemblPlants:AT2G46620
EnsemblPlants:AT2G46620.1entrez:819274Gene3D:3.40.50.300GeneID:819274
Genevisible:F4IJ77GO:GO:0005524GO:GO:0016021GO:GO:0016887
Gramene:AT2G46620.1hmmpanther:PTHR23070hmmpanther:PTHR23070:SF13HOGENOM:HOG000237995
InParanoid:F4IJ77InterPro:IPR003593InterPro:IPR003959InterPro:IPR025753
InterPro:IPR027417KEGG:ath:AT2G46620OMA:CAEERIMPaxDb:F4IJ77
Pfam:PF00004Pfam:PF14363PIR:B84905PRIDE:F4IJ77
ProteinModelPortal:F4IJ77Proteomes:UP000006548RefSeq:NP_182185.2SMART:SM00382
SMR:F4IJ77STRING:3702.AT2G46620.1SUPFAM:SSF52540TAIR:AT2G46620
TMHMM:TMhelixUniGene:At.19721UniProt:F4IJ77
Coordinates (TAIR10) chr2:-:19139071..19140546
Molecular Weight (calculated) 55913.30 Da
IEP (calculated) 9.48
GRAVY (calculated) -0.31
Length 491 amino acids
Sequence (TAIR10)
(BLAST)
001: MGILWDSFLL LLVSTFALFL VRILLFKTGL IYMVKLWRRK IIDWFHVYQF YKVPEFNDNV QENHLYQKVY MYLNSLSSIE NSDFTNLFTG KKSNEIILRL
101: DRNQVVGDEF LGARVCWING EDEDGARNFV LKIRKADKRR ILGSYLQHIH TVSDELEQRN TELKLFINVG IDDHLNKKKK KNGRWRSIPF DHPCTFDNIA
201: METDLKNKVK SDLESFLKGK QYYNRLGRVW KRSYLLYGPS GTGKSSFVAA MANFLDYDVY DIDLSKVVDD SDLKMLLLQT RGKSVIVIED LDRHLSTKST
301: AVNLSGILNF TDSILSSCTA DERIMVFTMT GKEQIDPAML RPGRVDVHIH FPLCDFTAFK TLANNYLGVK EHKLFSQVEG IFQNGASLSP AEIGELMIAN
401: RNSPTRALKH VINALQTDGD RRGTGRRLLL ENGSRKSTSE DVSDDMSGSL CGGGGGSSPA VKEFRKLYGL LRIKSSRKSG SFDVAREMRD G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)