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AT2G41760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.939
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function WDYHV (InterPro:IPR019161); Has 201 Blast hits to 201 proteins in 90 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Protein Annotations
BioGrid:4112EC:3.5.1.-eggNOG:ENOG4111G3SeggNOG:KOG3261
EMBL:AC002339EMBL:AK230318EMBL:AY037225EMBL:AY060532
EMBL:CP002685EnsemblPlants:AT2G41760EnsemblPlants:AT2G41760.1entrez:818775
Gene3D:3.10.620.10GeneID:818775Genevisible:O22944GO:GO:0016811
Gramene:AT2G41760.1hmmpanther:PTHR13035hmmpanther:PTHR13035:SF0HOGENOM:HOG000007890
InParanoid:O22944IntAct:O22944InterPro:IPR023128KEGG:00240+3.5.1.-
KEGG:00260+3.5.1.-KEGG:00332+3.5.1.-KEGG:00364+3.5.1.-KEGG:00480+3.5.1.-
KEGG:00520+3.5.1.-KEGG:00600+3.5.1.-KEGG:00760+3.5.1.-KEGG:00930+3.5.1.-
KEGG:ath:AT2G41760OMA:DRRHMKDPaxDb:O22944Pfam:O22944
Pfam:PF09764PhylomeDB:O22944PIR:G84845PRIDE:O22944
PRO:PR:O22944ProteinModelPortal:O22944Proteomes:UP000006548RefSeq:NP_565959.1
SMR:O22944STRING:3702.AT2G41760.1TAIR:AT2G41760UniGene:At.48579
UniGene:At.66406UniProt:O22944
Coordinates (TAIR10) chr2:+:17422864..17424255
Molecular Weight (calculated) 24973.60 Da
IEP (calculated) 5.06
GRAVY (calculated) -0.18
Length 221 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGVTSEPIA MDATRFQHTP YYCEENVYLL CKTLCENGVA EATCSDLFVV FISNEKKQVP LWHQKASTRA DGVVLWDYHV ICVQRKKESD SEPLVWDLDS
101: TLPFPSPLAS YVTETIQPSF QLFAEYQRFF RIVHAPLFFK HFASDRRHMK EPDGSWTAQP PPYEPIVAQD GILHNLSEYI AMSGADTLSS LDPETVTAAI
201: SQKLGVVVSH TQLQDLFTKL P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)