AT2G41450.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.960 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : N-acetyltransferases;N-acetyltransferases | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
N-acetyltransferases;N-acetyltransferases; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: intracellular; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181), BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: BRCT domain-containing DNA repair protein (TAIR:AT4G03130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:17278190..17281637 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 67895.00 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.49 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||
Length | 612 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAPKRASPMQ SSLYSIGDYE VAVDGKNFTC ESGPKSIQIK FPRNYRVKIS EKDKIVSDYP KEDMFLLLNP RDEDDFTKSH LQEVLKLYSK ELPDMRYASN 101: TGKQSAFLER CVSKGKYCSL VLKSTLGGDS DEILAAITYQ IVPADTQYAE IPLAAVTYTH QKKGFGKLVY EELMKRLHSV GIRTIYCWAD KESEGFWLKQ 201: GFIKLAEVDH KGKAKGLHIK SNIRKALCFP GGSTLMLSHL NKEFISNLEI SSSWKYQCEG SPLSARNNST GPVTGDSVKL RESFGESVYL DCISGIRSPM 301: DSITGKENNN VISDQATTAD SETKCSTPGL KRSWEASLSS LQSKRIRANN NNNSEIAKTD LAQSSAKQSK DGNSSQVDIT KDSLPTICKR NDVEQCRMAT 401: GIDMEARPNG QHYRILLMDI CDENKRAWLT EVIRKLGGTV TLDGTTSTHI VTGKVRKTLN LCTALCSGAW IVSPSWLKES VREGRFANEA SHILHDEDYQ 501: LKYDTDLKST VLRAKARPNS LLKGYDICVG PNIELPIKTS SAIIKSAGGN VISGVNKVKE ASKAIYIGCE EDTVGALFAA KKGIWTFSSE WFMNCVMKQQ 601: LDLQVPQFVE SL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)