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AT2G40090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ABC2 homolog 9
Curator
Summary (TAIR10)
member of ATH subfamily
Computational
Description (TAIR10)
ABC2 homolog 9 (ATH9); CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65950.1); Has 9031 Blast hits to 8998 proteins in 1777 species: Archae - 124; Bacteria - 4320; Metazoa - 397; Fungi - 498; Plants - 701; Viruses - 9; Other Eukaryotes - 2982 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0661eggNOG:KOG1235EMBL:AK175658EMBL:AK176037
EnsemblPlants:AT2G40090EnsemblPlants:AT2G40090.1entrez:818597ExpressionAtlas:Q67ZT0
GeneID:818597Gramene:AT2G40090.1InterPro:IPR004147InterPro:IPR011009
KEGG:ath:AT2G40090KO:K08869OMA:FRMDYCRPfam:O04212
Pfam:PF03109PhylomeDB:Q67ZT0RefSeq:NP_565923.1STRING:3702.AT2G40090.1
SUPFAM:SSF56112TAIR:AT2G40090tair10-symbols:ATATH9tair10-symbols:ATH9
TMHMM:TMhelixUniGene:At.44890UniProt:O04212UniProt:Q67ZT0
Coordinates (TAIR10) chr2:-:16737685..16740303
Molecular Weight (calculated) 60921.90 Da
IEP (calculated) 8.36
GRAVY (calculated) -0.11
Length 538 amino acids
Sequence (TAIR10)
(BLAST)
001: MAARSLWRTR TKLLVVGTAL CGGSGAAFIA SSDDPSTTLK LCTSIPVRLY RNTVTAASIA FDYEYSLLGL AEGSSERAKV KHEVHLRSAQ KLQELCFKNG
101: GIYIKLGQHI GQLEYLVPEE YVRTMRESML NKCPISSYEQ VCEVFKKEVG EMPDQVFAEF DPVPIASASL AQVHVARTHD GKKVAVKVQH AHMTDTAAAD
201: TAAVGVLVNT LHRIFPSFDY RWLLDEMSES LPKELDFLVE AKNNEKCLDN FRKLSPHIAE YVYAPTIYWN LSTSKLLTME FMDGAQVNDV DKIRKLGIQP
301: YEVSKLVSQT FAEMMFKHGF VHCDPHAANL IVRPDPSGKR NIYGKRKPQL VILDHGLYKE LDFNTRFNYA SLWKALVFSD AKAIKEHSEK LGAGDDLYVL
401: FAGILTMRPW KQVIDTSVDH LVIQGNKEDV SELQMYASQY FSEISELLRR LPRVILLMLK TNDCLRSVNN ELMQGSSLES FLIIGKVSSQ AVLEAKRAEK
501: KSLMKWLKVW FEGFSVEARL WVMQFALWIL QVRKSLTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)