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AT2G38180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SGNH hydrolase-type esterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT3G11210.1); Has 749 Blast hits to 745 proteins in 289 species: Archae - 0; Bacteria - 287; Metazoa - 79; Fungi - 158; Plants - 167; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:COG2755eggNOG:KOG3035EMBL:AC003028
EMBL:AY060593EMBL:BT021087EMBL:BT021116EMBL:CP002685
EnsemblPlants:AT2G38180EnsemblPlants:AT2G38180.1entrez:818396Gene3D:3.40.50.1110
GeneID:818396Genevisible:O80443GO:GO:0005576GO:GO:0016042
GO:GO:0016788Gramene:AT2G38180.1hmmpanther:PTHR14209hmmpanther:PTHR14209:SF10
HOGENOM:HOG000214294InParanoid:O80443InterPro:IPR013830KEGG:ath:AT2G38180
ncoils:CoilOMA:NEQLEPPPaxDb:O80443Pfam:O80443
Pfam:PF00657Pfam:PF13472PhylomeDB:O80443PIR:T01250
PRIDE:O80443PRO:PR:O80443ProteinModelPortal:O80443Proteomes:UP000006548
RefSeq:NP_565883.1SMR:O80443STRING:3702.AT2G38180.1SUPFAM:SSF52266
TAIR:AT2G38180UniGene:At.12460UniProt:O80443
Coordinates (TAIR10) chr2:+:15997187..15998751
Molecular Weight (calculated) 35407.20 Da
IEP (calculated) 5.51
GRAVY (calculated) -0.31
Length 312 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGPVRPQIV LFGSSIVQYS FTDRGWGATL ADLYSRTADI ILRGYAGWNS RFALKVLHQV FPKDAVIQPS LVIVYFGGND STHPHPSGHG PHVPLSEFIE
101: NMRKIGEHLL SLSDKTRVIF LTPPPMNEKQ IEIVFGDAIK GRSNELCRPY AEELLNLCRE INVKGIDIWT AIQQQDDWLN SCFTDGIHFT AKASEIVVKE
201: ILKVLRGADW KPSLYWKSLP VEFPFDFDAP NSISLHDLEL TRNNHFESPH LVSLCEQELT RNEQLEPPHP VSLCDHELTR NEQLEPPHPV SLCDHELTQN
301: EQLEPPQPTA RL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)