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AT2G36070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:22540835 (2012): mitochondrion
  • PMID:21841088 (2011): mitochondrion
  • PMID:21472856 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:18385124 (2008): mitochondrion
  • PMID:14730085 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : translocase inner membrane subunit 44-2
Curator
Summary (TAIR10)
One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.
Computational
Description (TAIR10)
translocase inner membrane subunit 44-2 (TIM44-2); FUNCTIONS IN: protein-transmembrane transporting ATPase activity; INVOLVED IN: protein targeting to mitochondrion; LOCATED IN: mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim44-related (InterPro:IPR007379); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 44-1 (TAIR:AT2G20510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Y5IKeggNOG:KOG2580EMBL:AC007017EMBL:BT015810
EMBL:CP002685EnsemblPlants:AT2G36070EnsemblPlants:AT2G36070.1entrez:818180
GeneID:818180Genevisible:Q5XF06GO:GO:0005739GO:GO:0005743
GO:GO:0005744GO:GO:0006626GO:GO:0015462GO:GO:0030150
GO:GO:0051087Gramene:AT2G36070.1hmmpanther:PTHR10721hmmpanther:PTHR10721:SF1
HOGENOM:HOG000070609InParanoid:Q5XF06InterPro:IPR007379InterPro:IPR032710
iPTMnet:Q5XF06KEGG:ath:AT2G36070KO:K17804ncoils:Coil
OMA:GNGFASHPaxDb:Q5XF06Pfam:PF04280Pfam:Q5XF06
PhylomeDB:Q5XF06PIR:E84776PRIDE:Q5XF06PRO:PR:Q5XF06
ProteinModelPortal:Q5XF06Proteomes:UP000006548RefSeq:NP_181151.3SMART:SM00978
SMR:Q5XF06STRING:3702.AT2G36070.1SUPFAM:SSF54427TAIR:AT2G36070
tair10-symbols:ATTIM44-2tair10-symbols:TIM44-2UniGene:At.37595UniProt:Q5XF06
Coordinates (TAIR10) chr2:-:15145119..15147895
Molecular Weight (calculated) 53648.60 Da
IEP (calculated) 9.26
GRAVY (calculated) -0.78
Length 469 amino acids
Sequence (TAIR10)
(BLAST)
001: MASRKLVRDL LITKQPLLQQ LVHQRRVGAR LGLLQGNGFA SHRRFSVFSE FSKKIRGEAD SNPEFQKTVK EFKERAEELQ GVKEDLKVRT KQTTEKLYKQ
101: GQGVWTEAES VAKKVSSSVK DKFSAATEEV KESFKLGKEE SAESASSSGT GTTEGEKQQQ QSGSTEEQDT FFGKFKSSIS SPKLSEAFHK PLDFAKKGLD
201: IVKDELRGNP SKRKHLEYTP PPPFTGERST RTEMVIMPTK QSKWQKKWES LREKMQGYPV FKRLSGMSEP VVNKSQEIAE DVREKWETSD NPIVHKIQDM
301: NERIFEETGS ASTYKEIRRR DPSFSLPDFV SEIQEAIRPV LNAYSKGDAK TLKKYCSKEL IERCTAEHRA FTSQGYFFDH KLLHVSEVDI QETKMMGTTP
401: VIIVRFQTQE IFCVRDQDGK IKEGGQDTIH TVYYDWAMQQ VDAAELGEDA IYPIWRLREM LRAGVQALI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)