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AT2G35160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SU(VAR)3-9 homolog 5
Curator
Summary (TAIR10)
Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.
Computational
Description (TAIR10)
SU(VAR)3-9 homolog 5 (SUVH5); FUNCTIONS IN: histone methyltransferase activity; INVOLVED IN: maintenance of DNA methylation, histone methylation, regulation of gene expression, epigenetic, response to chitin, chromatin silencing by small RNA; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 6 (TAIR:AT2G22740.1); Has 5295 Blast hits to 5101 proteins in 461 species: Archae - 0; Bacteria - 388; Metazoa - 2414; Fungi - 548; Plants - 1120; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G35160-MONOMERBioGrid:3429EC:2.1.1.43eggNOG:COG2940
eggNOG:COG3440eggNOG:KOG1082EMBL:AC004667EMBL:AF344448
EMBL:AY062735EMBL:BT003374EMBL:CP002685EnsemblPlants:AT2G35160
EnsemblPlants:AT2G35160.1entrez:818083EvolutionaryTrace:O82175Gene3D:2.30.280.10
GeneID:818083Genevisible:O82175GO:GO:0000775GO:GO:0005634
GO:GO:0008270GO:GO:0010200GO:GO:0016571GO:GO:0018024
GO:GO:0031048GO:GO:0040029GO:GO:0042054Gramene:AT2G35160.1
hmmpanther:PTHR22884hmmpanther:PTHR22884:SF370HOGENOM:HOG000154454InParanoid:O82175
IntAct:O82175InterPro:IPR001214InterPro:IPR003105InterPro:IPR003616
InterPro:IPR007728InterPro:IPR015947InterPro:IPR025794KEGG:ath:AT2G35160
KO:K11420OMA:KETLPICPaxDb:O82175PDB:3Q0B
PDB:3Q0CPDB:3Q0DPDB:3Q0FPDB:4YGI
PDBsum:3Q0BPDBsum:3Q0CPDBsum:3Q0DPDBsum:3Q0F
PDBsum:4YGIPfam:O82175Pfam:PF00856Pfam:PF02182
Pfam:PF05033Pfscan:PS50280Pfscan:PS50867Pfscan:PS50868
Pfscan:PS51015Pfscan:PS51575PhylomeDB:O82175PIR:D84765
PRIDE:O82175PRO:PR:O82175PROSITE:PS50280PROSITE:PS50867
PROSITE:PS50868PROSITE:PS51015PROSITE:PS51575ProteinModelPortal:O82175
Proteomes:UP000006548RefSeq:NP_181061.1SMART:SM00317SMART:SM00466
SMART:SM00468SMART:SM00508SMR:O82175STRING:3702.AT2G35160.1
SUPFAM:SSF82199SUPFAM:SSF88697TAIR:AT2G35160tair10-symbols:SGD9
tair10-symbols:SUVH5UniGene:At.12724UniProt:O82175
Coordinates (TAIR10) chr2:+:14823562..14825946
Molecular Weight (calculated) 88157.80 Da
IEP (calculated) 6.76
GRAVY (calculated) -0.58
Length 794 amino acids
Sequence (TAIR10)
(BLAST)
001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)