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AT2G33640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DHHC-type zinc finger family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4820 Blast hits to 4679 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 2062; Fungi - 621; Plants - 835; Viruses - 0; Other Eukaryotes - 1302 (source: NCBI BLink).
Protein Annotations
BRENDA:2.3.1.225EC:2.3.1.225eggNOG:COG5273eggNOG:KOG1311
EMBL:AC002332EMBL:AY102547EMBL:AY649312EMBL:CP002685
EnsemblPlants:AT2G33640EnsemblPlants:AT2G33640.1entrez:817930GeneID:817930
Genevisible:Q6DR03GO:GO:0005886GO:GO:0008270GO:GO:0016021
GO:GO:0019706Gramene:AT2G33640.1hmmpanther:PTHR22883hmmpanther:PTHR22883:SF72
HOGENOM:HOG000242421InParanoid:Q6DR03InterPro:IPR001594iPTMnet:Q6DR03
KEGG:ath:AT2G33640KO:K18932OMA:YVAISVYPaxDb:Q6DR03
Pfam:PF01529Pfam:Q6DR03Pfscan:PS50216PhylomeDB:Q6DR03
PIR:A84748PRIDE:Q6DR03PRO:PR:Q6DR03PROSITE:PS50216
ProteinModelPortal:Q6DR03Proteomes:UP000006548RefSeq:NP_180922.2STRING:3702.AT2G33640.1
TAIR:AT2G33640TMHMM:TMhelixUniGene:At.37901UniProt:Q6DR03
Coordinates (TAIR10) chr2:+:14239500..14242240
Molecular Weight (calculated) 62141.90 Da
IEP (calculated) 8.15
GRAVY (calculated) -0.17
Length 565 amino acids
Sequence (TAIR10)
(BLAST)
001: MARRHGWQLP AHTFQVVAIT VFFLLTVAYY AFFAPFLGNK LYEYIAIGVY SFLAFSVLVL YIRCTGIDPA DPGIFVKADN TPAHKSQNSN YVPENASAID
101: GGPYIRHGSG CCSAIGRFIC GCLVIQDCRR DTQQEQSNEQ EEALFCSLCN AEVRMFSKHC RSCGKCVDGF DHHCRWLNNC VGQKNYISFV CLMAASFFWL
201: IAEFGVGVTV FVRCFVDQKA MEHLITEKLG LGFSRPPFAA VVVVCTTLSL LALIPLGELF FFHMILIRKG ITTYEYVVAL RAQTEPLGTS VDELDQTSQY
301: PSPASSAVTA TSARSSLGLS IQYRGASLCT PPNIFVDQQD DVIQHLEPGP VRSTIDPDSL SQKKPPQRQQ VRINPWKLAK LDSKEASKAA AKARASSSVL
401: LPVSSRQNPY KTSSNVSGRS SPGRGKPADS ESCSLSSPGL TRDHFNPMYM SSPANESPLN EEESRNAVVA ARRNLPSSDE SSVVWDPEAG RFVSLSRIPG
501: TDVGGPLGNE CLNTITSTGT DRSRRARGNP LTGYFQQVRS QRGDQLPVFM PTDSQLHRHL STRFH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)