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AT2G33590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, lignin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33600.1); Has 13062 Blast hits to 13044 proteins in 1974 species: Archae - 275; Bacteria - 5592; Metazoa - 467; Fungi - 894; Plants - 2514; Viruses - 60; Other Eukaryotes - 3260 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G33590-MONOMEReggNOG:COG0451eggNOG:KOG1502EMBL:AC002332
EMBL:AY084584EMBL:AY120714EMBL:BT000055EMBL:CP002685
EnsemblPlants:AT2G33590EnsemblPlants:AT2G33590.1entrez:817925Gene3D:3.40.50.720
GeneID:817925GO:GO:0003824GO:GO:0009408GO:GO:0009414
GO:GO:0009737GO:GO:0046686GO:GO:0050662Gramene:AT2G33590.1
hmmpanther:PTHR10366hmmpanther:PTHR10366:SF461HOGENOM:HOG000167998InterPro:IPR001509
InterPro:IPR016040KEGG:ath:AT2G33590OMA:CLAKTRAPfam:PF01370
PhylomeDB:O22809PIR:D84747Proteomes:UP000006548RefSeq:NP_180917.1
SMR:O22809STRING:3702.AT2G33590.1SUPFAM:SSF51735TAIR:AT2G33590
UniGene:At.19951UniProt:O22809
Coordinates (TAIR10) chr2:+:14224622..14226365
Molecular Weight (calculated) 35877.10 Da
IEP (calculated) 6.92
GRAVY (calculated) -0.18
Length 321 amino acids
Sequence (TAIR10)
(BLAST)
001: MADVHKGKVC VTGAGGFLGS WVVDLLLSKD YFVHGTVRDP DNEKYAHLKK LEKAGDKLKL FKADLLDYGS LQSAIAGCSG VFHVACPVPP ASVPNPEVEL
101: IAPAVDGTLN VLKACIEANV KRVVYVSSVA AAFMNPMWSK NQVLDEACWS DQEYCKKTEN WYCLAKTRAE SEAFEFAKRT GLHLVSVCPT LVLGPILQQN
201: TVNASSLVLL KLLKEGFETR DNQERHLVDV RDVAQALLLV YEKAEAEGRY ICTSHTVKEE IVVEKLKSFY PHYNYPKKYI DAEDRVKVSS EKLQKLGWTY
301: RPLEETLVDS VESYRKAKLV D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)