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AT2G33400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 3875 Blast hits to 2949 proteins in 323 species: Archae - 6; Bacteria - 281; Metazoa - 960; Fungi - 593; Plants - 281; Viruses - 98; Other Eukaryotes - 1656 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JCNNeggNOG:ENOG41114DAEMBL:AY144106EMBL:CP002685
EnsemblPlants:AT2G33400EnsemblPlants:AT2G33400.1entrez:817904GeneID:817904
Gramene:AT2G33400.1hmmpanther:PTHR33318hmmpanther:PTHR33318:SF4KEGG:ath:AT2G33400
ncoils:CoilOMA:CSYEPLLPhylomeDB:Q8H1N0Proteomes:UP000006548
RefSeq:NP_180898.2TAIR:AT2G33400UniGene:At.37932UniGene:At.75614
UniProt:Q8H1N0
Coordinates (TAIR10) chr2:-:14153331..14154401
Molecular Weight (calculated) 31134.60 Da
IEP (calculated) 4.34
GRAVY (calculated) -1.16
Length 272 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCFMGCFGL SSNKKRRNSI RKILPRDQRI CSYEPLLSSD PTDFSTVSDN PEKISNSNLR SEVGEEEEKK KVTKKTRKRV RFDLNVQTYE PIVPSRYENA
101: CSDDEEGKGG RSKGSSAIDK KPEDLSSRSV YPSNYRYHNC VDSFEDEDDE MGYGESDLED EDYYTDNEND YEDDADDEDE EEEEENEQDV APLLNPVENL
201: AQWKAVKARP VKVKRVMKEN VEEDMDDQAK PLLKEIIVNT SLSNWLASPK SLHANGSSKR SPIVDITNME NR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)