AT2G32610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase-like B1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a gene similar to cellulose synthase | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cellulose synthase-like B1 (CSLB01); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13836234..13839513 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85065.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 757 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADSSFSLPP LCERISYTNY FLRAVYLTVL GLFFSLLLHR IRHTSEYDNV WLVAFFCESC FFLVCLLITC LKWSPADTKP FPDRLDERVH DLPSVDMFVP 101: TADPVREPPI MVVDTVLSLL AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNTRVRAP SRYFLKPISV ATEDYEFNRD WEKTKREYEK 201: LRRKVEDATG DSHMLDVEDD FEAFSNTKPN DHSTLVKVVW ENKGGVGDEK EIPHIIYISR EKRPNYVHNQ KCGAMNFLAR VSGLMTNAPY ILNVDCDMYA 301: NDADVVRQAM CILLQESLNM KHCAFVQFRQ EFYDSSTELI VVLQSHLGRG IAGIQGPIYI GSGCVHTRRV MYGLSPDDFE VDGSLSSVAT REFLVKDSLA 401: RRFGNSKEMM KSVVDAIQRN PNPQNILTNS IEAAREVGHC QYEYQTSWGN TIGWLYDSVA EDLNTSIGIH SRGWTSSYIS PDTPAFLGSM PAGVPEALLQ 501: QRRWATGWIE ILFNKQSPLR GLFSKKIRFR QRLAYLCIIT CLRSIPELIY CLLPAYCLLH NSTLFPKGLY LGITVTLVGI HCLYTLWEFM SLGYSVQSWL 601: VSQSVWRIVA TSSWLFSIFD ITLKLLGISE TVFIITKKTV AGTKSALGSG PSQGEDVGPN SDLFKFEFDG SLCFLPGTFI VLVNIAALAV FSVGLQRSSY 701: SHEGGGSGLA EACGCVLVMM LFLPFLMGLF KKGKYGTPLS TLSIAGFLAV LFVVFSV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)