AT2G30720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Thioesterase/thiol ester dehydrase-isomerase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Thioesterase/thiol ester dehydrase-isomerase superfamily protein; BEST Arabidopsis thaliana protein match is: Thioesterase/thiol ester dehydrase-isomerase superfamily protein (TAIR:AT5G48370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13089604..13091538 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51525.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.64 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||
| Length | 455 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRSSAGKLLS HSLRRNRGKL GDGFWIPATR SQKMWNSTVP SDENPDQNSI DAGSSMRKPI SLWPGMYHSP VTNALWEARR NMFEIPTGDD ASQSKLTAKS 101: PSRSRTSILY KFSSDFVLRE QYRNPWNEIR TGKLVEDLDA LAGTISFKHC GGDSSARSMI LVTASVDRII MKRPIRVDTD LSIVGAVTWV GRSSMEMQLQ 201: VLQIQDTNNS SESVALEANF TFVARDAQTG KSAPINQVVP ETEHEKFLWK EAEERNKLRK QKRAQGKEEH EKLKDLERLN ELLAEGRVFL DMPALADRNS 301: ILIKDTSHEN SLICQPQQRN IHGRIFGGFL MRKAFELAFS NAYTFAGVSP RFLEVDRVDF IKPVDVGNFL RFKSRVLYTE ATSSAEPLIN IEVVAHVTSP 401: ELRSSEVSNR FYFTFSVRPE AMKDGLKIRN VVPATEEEAR RVIERMDAER PISLP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)