suba logo
AT2G30070.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
vacuole 0.628
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : potassium transporter 1
Curator
Summary (TAIR10)
Encodes a high affinity potassium transporter.
Computational
Description (TAIR10)
potassium transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3625 Blast hits to 3386 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 100; Plants - 989; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink).
Protein Annotations
eggNOG:COG3158eggNOG:ENOG410IEMHEMBL:AC004680EMBL:AF033118
EMBL:AK221387EnsemblPlants:AT2G30070EnsemblPlants:AT2G30070.1entrez:817558
ExpressionAtlas:Q56YD6GeneID:817558GO:GO:0015079GO:GO:0016021
Gramene:AT2G30070.1hmmpanther:PTHR30540hmmpanther:PTHR30540:SF12InterPro:IPR003855
KEGG:ath:AT2G30070KO:K03549OMA:TNMMGHAPaxDb:Q56YD6
Pfam:O22397Pfam:PF02705PhylomeDB:Q56YD6PRIDE:Q56YD6
ProteinModelPortal:Q56YD6RefSeq:NP_180568.1STRING:3702.AT2G30070.1TAIR:AT2G30070
tair10-symbols:ATKT1tair10-symbols:ATKT1Ptair10-symbols:ATKUP1tair10-symbols:KT1
tair10-symbols:KUP1TIGRfam:TIGR00794TIGRFAMs:TIGR00794TMHMM:TMhelix
UniGene:At.10484UniGene:At.66278UniProt:O22397UniProt:Q56YD6
Coordinates (TAIR10) chr2:+:12835097..12838466
Molecular Weight (calculated) 79131.30 Da
IEP (calculated) 7.49
GRAVY (calculated) 0.48
Length 712 amino acids
Sequence (TAIR10)
(BLAST)
001: MNQSPSLIEQ GISQQHLKTL SCANVLTLAY QSLGVIYGDL STSPLYVYKT TFSGKLSLHE DDEEIFGVFS FIFWTFTLIA LFKYVFIVLS ADDNGEGGTF
101: ALYSLLCRYA KLSILPNHQE MDEKLSTYAT GSPGETRQSA AVKSFFEKHP KSQKCLLLFV LLGTCMAIGD SVLTPTISVL SAVSGVKLKI PNLHENYVVI
201: IACIILVAIF SVQRYGTHRV AFIFAPISTA WLLSISSIGV YNTIKWNPRI VSALSPVYMY KFLRSTGVEG WVSLGGVVLS ITGVETMFAD LGHFSSLSIK
301: VAFSFFVYPC LILAYMGEAA FLSKHHEDIQ QSFYKAIPEP VFWPVFIVAT FAAVVGSQAV ISATFSIISQ CCALDCFPRV KIIHTSSKIH GQIYIPEVNW
401: MLMCLCLAVT IGLRDTNMMG HAYGLAVTSV MLVTTCLMTL VMTIVWKQRI ITVLAFVVFF GSIELLYFSS CVYKVPEGGW IPILLSLTFM AVMYIWNYGT
501: TKKHEFDVEN KVSMDRIVSL GPSIGMVRVP GIGLVYSNLV TGVPAVFGHF VTNLPAFHKI LVFVCVKSVQ VPYVGEEERF VISRVGPKEY GMFRSVVRYG
601: YRDVPREMYD FESRLVSAIV EFVETEPGLE EEEMSSVRRK KEECMEIMEA KEAGVAYILG HSYAKAKQSS SVLKKLAVNV VFAFMSTNCR GTDVVLNVPH
701: TSLLEVGMVY YV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)