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AT2G18030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peptide methionine sulfoxide reductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peptide methionine sulfoxide reductase family protein; FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein modification process, protein metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptide methionine sulphoxide reductase MsrA (InterPro:IPR002569); BEST Arabidopsis thaliana protein match is: peptidemethionine sulfoxide reductase 1 (TAIR:AT5G61640.1); Has 10082 Blast hits to 10080 proteins in 2433 species: Archae - 128; Bacteria - 6167; Metazoa - 196; Fungi - 136; Plants - 231; Viruses - 1; Other Eukaryotes - 3223 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G18030-MONOMERBioCyc:ARA:GQT-446-MONOMERBRENDA:1.8.4.11EC:1.8.4.11
eggNOG:COG0225eggNOG:KOG1635EMBL:AC006201EMBL:AK227376
EMBL:BT003071EMBL:BX819229EMBL:CP002685EnsemblPlants:AT2G18030
EnsemblPlants:AT2G18030.1entrez:816315Gene3D:3.30.1060.10GeneID:816315
Genevisible:Q9SL43GO:GO:0006979GO:GO:0008113GO:GO:0030091
HAMAP:MF_01401hmmpanther:PTHR10173hmmpanther:PTHR10173:SF28HOGENOM:HOG000263863
InParanoid:Q9SL43InterPro:IPR002569InterPro:IPR028427KEGG:ath:AT2G18030
KO:K07304OMA:IRKGWPVPANTHER:PTHR10173PaxDb:Q9SL43
Pfam:PF01625Pfam:Q9SL43PhylomeDB:Q9SL43PIR:D84559
PRIDE:Q9SL43PRO:PR:Q9SL43ProteinModelPortal:Q9SL43Proteomes:UP000006548
RefSeq:NP_179394.1RefSeq:NP_973483.1SMR:Q9SL43STRING:3702.AT2G18030.1
SUPFAM:SSF55068TAIR:AT2G18030TIGRfam:TIGR00401TIGRFAMs:TIGR00401
TMHMM:TMhelixUniGene:At.27637UniProt:Q9SL43
Coordinates (TAIR10) chr2:+:7840207..7841496
Molecular Weight (calculated) 28929.40 Da
IEP (calculated) 8.31
GRAVY (calculated) -0.32
Length 254 amino acids
Sequence (TAIR10)
(BLAST)
001: MAISLKRNRF FIPYTNLVFF FFLCVSLLDK TVSIRISNQI SDTVVDSPDR PLKSAVFALG SFWRSEAAFG CINGVVRTSA GYAGGTKTNP EYRNLGDHAE
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)