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AT2G15730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.723
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIW2eggNOG:ENOG410XT9YEMBL:BT011217EMBL:BT012148
EMBL:CP002685EnsemblPlants:AT2G15730EnsemblPlants:AT2G15730.1entrez:816067
Gene3D:3.40.50.300GeneID:816067GO:GO:0005794GO:GO:0016021
GO:GO:0016787Gramene:AT2G15730.1hmmpanther:PTHR32175hmmpanther:PTHR32175:SF0
HOGENOM:HOG000238344InterPro:IPR027417KEGG:ath:AT2G15730OMA:GDEHSLI
PhylomeDB:Q6NM29Proteomes:UP000006548RefSeq:NP_179175.3SUPFAM:SSF52540
TAIR:AT2G15730TMHMM:TMhelixUniGene:At.40360UniProt:Q6NM29
Coordinates (TAIR10) chr2:+:6849797..6851881
Molecular Weight (calculated) 39806.20 Da
IEP (calculated) 9.37
GRAVY (calculated) -0.31
Length 344 amino acids
Sequence (TAIR10)
(BLAST)
001: MGDEHSLIPK DSFVFKLPKK SPLVLRTVVL LFVMVCTVYI CSICLKQIGV VPSAGFLNVE VFERPCPEPN IQPWDIPYVH YPKPKTYSRE ECSCNPVRYF
101: AILSMQRSGS GWFETLLNNH TNISSNGEIF SVKDRRANVS TIFETLDKVY NLDWLSSASK NECTSAVGLK WMLNQGLMKN HEEIVEYFKT RGVSAIFLFR
201: RNLLRRMISV LANSYDRDAK PLNGTHKSHV HSPKEAEILA RYKPLINTSL LIPDLKQVQE MTSKALAYFN TTRHIFLYYE DVVKNRTKLD DVQEFLKVPK
301: LDLKSRQVKI HHGPLSQHVQ NWEEVQKTLK GTGFENFLLE DYRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)