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AT2G14850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33890.2); Has 140 Blast hits to 132 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 133; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKJ9eggNOG:ENOG410YAE8EMBL:AC004705EMBL:AC005396
EMBL:AY065427EMBL:AY096378EMBL:CP002685EnsemblPlants:AT2G14850
EnsemblPlants:AT2G14850.1entrez:815974GeneID:815974GO:GO:0070461
Gramene:AT2G14850.1hmmpanther:PTHR21277hmmpanther:PTHR21277:SF12HOGENOM:HOG000240434
InterPro:IPR024738KEGG:ath:AT2G14850OMA:KAQRLPMPfam:PF12767
PhylomeDB:O82785PIR:T02592PRO:PR:O82785Proteomes:UP000006548
RefSeq:NP_179091.1STRING:3702.AT2G14850.1TAIR:AT2G14850UniGene:At.27715
UniGene:At.50077UniProt:O82785
Coordinates (TAIR10) chr2:+:6386400..6387275
Molecular Weight (calculated) 32694.50 Da
IEP (calculated) 9.96
GRAVY (calculated) -0.56
Length 291 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSDQCFSRL NSLEIKALIY QKIGHQRADT YFDQLGKFLT SRISKSEFDK LCSKTVGREN ISLHNRLVRS ILKNASVAKS PPPRYPKKSL YGDPVFPPSP
101: RKCRSRKFRD RPSPLGPLGK PQSLTTTNDE SMSKAQRLPM EVVSVEDGEE VEQMTGSPSV QSRSPLTAPL GVSFHLKSKA RFSTYNGINR ETCQSSGELP
201: DMITLRARLE KKLEMEGIKL SMDSANLLNR GLNAYMRRLI EPCLSLASQQ KRAVSNVSML DFHAAMEVNP RVLGEEWPIQ LEKICCRASE E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)