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AT2G06925.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Phospholipase A2 family protein
Curator
Summary (TAIR10)
Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine.
Computational
Description (TAIR10)
PLA2-ALPHA; FUNCTIONS IN: phospholipase A2 activity; INVOLVED IN: phospholipid metabolic process, lipid catabolic process; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase A2 (InterPro:IPR016090), Phospholipase A2, active site (InterPro:IPR013090), Phospholipase A2, eukaryotic (InterPro:IPR001211); BEST Arabidopsis thaliana protein match is: Phospholipase A2 family protein (TAIR:AT4G29470.1); Has 123 Blast hits to 123 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 110; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G06925-MONOMERBioCyc:MetaCyc:AT2G06925-MONOMERBRENDA:3.1.1.4DIP:DIP-59549N
EC:3.1.1.4eggNOG:ENOG410IXQNeggNOG:ENOG410YKKMEMBL:AC005171
EMBL:AK221680EMBL:AY088532EMBL:AY136317EMBL:AY344842
EMBL:BT002200EMBL:CP002685EnsemblPlants:AT2G06925EnsemblPlants:AT2G06925.1
entrez:815261Gene3D:1.20.90.10GeneID:815261Genevisible:Q8S8N6
GO:GO:0004623GO:GO:0005509GO:GO:0005576GO:GO:0005634
GO:GO:0005773GO:GO:0005794GO:GO:0016023GO:GO:0016042
Gramene:AT2G06925.1gramene_pathway:3.1.1.4gramene_pathway:LIPASYN-PWYgramene_plant_reactome:1119332
gramene_plant_reactome:6875630hmmpanther:PTHR11716hmmpanther:PTHR11716:SF54HOGENOM:HOG000239931
InParanoid:Q8S8N6InterPro:IPR001211InterPro:IPR016090InterPro:IPR033113
KEGG:00564+3.1.1.4KEGG:00565+3.1.1.4KEGG:00590+3.1.1.4KEGG:00591+3.1.1.4
KEGG:00592+3.1.1.4KEGG:ath:AT2G06925KO:K01047OMA:KFINCMN
PANTHER:PTHR11716PaxDb:Q8S8N6Pfam:Q8S8N6PhylomeDB:Q8S8N6
PRIDE:Q8S8N6PRO:PR:Q8S8N6PROSITE:PS00118ProteinModelPortal:Q8S8N6
Proteomes:UP000006548RefSeq:NP_565337.1scanprosite:PS00118SMR:Q8S8N6
STRING:3702.AT2G06925.1SUPFAM:SSF48619TAIR:AT2G06925tair10-symbols:ATSPLA2-ALPHA
tair10-symbols:PLA2-ALPHATMHMM:TMhelixUniGene:At.23179UniProt:Q8S8N6
Coordinates (TAIR10) chr2:-:2842475..2843212
Molecular Weight (calculated) 16322.90 Da
IEP (calculated) 7.78
GRAVY (calculated) 0.06
Length 148 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAPIILFSF LLFFSVSVSA LNVGVQLIHP SISLTKECSR KCESEFCSVP PFLRYGKYCG LLYSGCPGER PCDGLDSCCM KHDACVQSKN NDYLSQECSQ
101: KFINCMNNFS QKKQPTFKGN KCDADEVIDV ISIVMEAALI AGKVLKKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)