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AT2G06255.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ELF4-like 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ELF4-like 3 (ELF4-L3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 4 (TAIR:AT1G17455.2); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZC4eggNOG:ENOG410Y56ZEMBL:AC006918EMBL:AY086681
EMBL:CP002685EnsemblPlants:AT2G06255EnsemblPlants:AT2G06255.1entrez:815182
GeneID:815182Genevisible:Q8S8F5GO:GO:0005634GO:GO:0042803
GO:GO:0048511Gramene:AT2G06255.1hmmpanther:PTHR33469hmmpanther:PTHR33469:SF3
HOGENOM:HOG000240133InParanoid:Q8S8F5InterPro:IPR009741KEGG:ath:AT2G06255
ncoils:CoilOMA:HESTIPDPaxDb:Q8S8F5Pfam:PF07011
Pfam:Q8S8F5PhylomeDB:Q8S8F5PRO:PR:Q8S8F5Proteomes:UP000006548
RefSeq:NP_565334.1TAIR:AT2G06255tair10-symbols:ELF4-L3UniGene:At.41090
UniProt:Q8S8F5
Coordinates (TAIR10) chr2:+:2459336..2459665
Molecular Weight (calculated) 12311.60 Da
IEP (calculated) 7.80
GRAVY (calculated) -0.71
Length 109 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGDTISRMM GSGVQMDGKI LQTFEKSFVQ VQNILDHNRL LINEINQNHE SKIPDNLGRN VGLIRELNNN VRRVAHLYVD LSNNFSKSME ASSEGDSSEG
101: RGNRRIRPA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)