AT2G05620.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : proton gradient regulation 5 | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Involved in electron flow in Photosystem I. Essential for photoprotection. | ||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
proton gradient regulation 5 (PGR5); FUNCTIONS IN: electron carrier activity; INVOLVED IN: response to water deprivation, response to high light intensity, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; Has 90 Blast hits to 90 proteins in 40 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:2081204..2081687 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 14293.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 11.34 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 133 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAAASISAIG CNQTLIGTSF YGGWGSSISG EDYQTMLSKT VAPPQQARVS RKAIRAVPMM KNVNEGKGLF APLVVVTRNL VGKKRFNQLR GKAIALHSQV 101: ITEFCKSIGA DAKQRQGLIR LAKKNGERLG FLA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)