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AT2G02930.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.943
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase F3
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase F3 (GSTF3); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: phloem, leaf; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 13914 Blast hits to 13903 proteins in 1392 species: Archae - 0; Bacteria - 7907; Metazoa - 1739; Fungi - 775; Plants - 1190; Viruses - 0; Other Eukaryotes - 2303 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G02930-MONOMEREC:2.5.1.18eggNOG:COG0625eggNOG:KOG0867
EMBL:AC004138EMBL:AF288181EMBL:AK229226EMBL:BT024921
EMBL:CP002685EnsemblPlants:AT2G02930EnsemblPlants:AT2G02930.1entrez:814822
Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:814822Genevisible:Q9SLM6
GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0005886
GO:GO:0006749GO:GO:0009407GO:GO:0009636GO:GO:0050832
Gramene:AT2G02930.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF201HOGENOM:HOG000125746
InParanoid:Q9SLM6InterPro:IPR004045InterPro:IPR004046InterPro:IPR010987
InterPro:IPR012336KEGG:ath:AT2G02930KO:K00799OMA:IAQYAIM
PaxDb:Q9SLM6Pfam:PF00043Pfam:PF02798Pfam:Q9SLM6
Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9SLM6PIR:D84442
PRIDE:Q9SLM6PRO:PR:Q9SLM6PROSITE:PS50404PROSITE:PS50405
ProteinModelPortal:Q9SLM6Proteomes:UP000006548RefSeq:NP_178394.1SMR:Q9SLM6
STRING:3702.AT2G02930.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT2G02930
tair10-symbols:ATGSTF3tair10-symbols:GST16tair10-symbols:GSTF3UniGene:At.22195
UniGene:At.24972UniProt:Q9SLM6
Coordinates (TAIR10) chr2:-:851348..852106
Molecular Weight (calculated) 24121.90 Da
IEP (calculated) 6.73
GRAVY (calculated) -0.31
Length 212 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)