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AT1G02920.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30961429 (2019): nucleus
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:19329564 (2009): peroxisome
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase 7
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase 7 (GSTF7); FUNCTIONS IN: glutathione transferase activity, copper ion binding, cobalt ion binding, glutathione binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, response to salt stress, defense response to bacterium, toxin catabolic process; LOCATED IN: nucleus, vacuole, cytoplasm; EXPRESSED IN: root, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase 6 (TAIR:AT1G02930.2); Has 10685 Blast hits to 10678 proteins in 1256 species: Archae - 0; Bacteria - 5560; Metazoa - 1482; Fungi - 785; Plants - 1082; Viruses - 0; Other Eukaryotes - 1776 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G02920-MONOMERBioGrid:24530EC:2.5.1.18eggNOG:COG0625
eggNOG:KOG0867EMBL:AC009525EMBL:AF288177EMBL:AY062642
EMBL:AY093281EMBL:CP002684EMBL:Y14251EnsemblPlants:AT1G02920
EnsemblPlants:AT1G02920.1entrez:839295Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:839295Genevisible:Q9SRY5GO:GO:0004364GO:GO:0005507
GO:GO:0005634GO:GO:0005737GO:GO:0005773GO:GO:0005829
GO:GO:0006749GO:GO:0009407GO:GO:0009636GO:GO:0009651
GO:GO:0009817GO:GO:0042742GO:GO:0043295GO:GO:0046686
GO:GO:0050897Gramene:AT1G02920.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF201
HOGENOM:HOG000125746InParanoid:Q9SRY5IntAct:Q9SRY5InterPro:IPR004045
InterPro:IPR004046InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT1G02920
KO:K00799OMA:KEPFIFRPaxDb:Q9SRY5Pfam:PF00043
Pfam:PF02798Pfam:Q9SRY5Pfscan:PS50404Pfscan:PS50405
PhylomeDB:Q9SRY5PIR:F86159PRIDE:Q9SRY5PRO:PR:Q9SRY5
PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9SRY5Proteomes:UP000006548
RefSeq:NP_171791.1SMR:Q9SRY5STRING:3702.AT1G02920.1SUPFAM:SSF47616
SUPFAM:SSF52833SWISS-2DPAGE:Q9SRY5TAIR:AT1G02920tair10-symbols:ATGST11
tair10-symbols:ATGSTF7tair10-symbols:ATGSTF8tair10-symbols:GST11tair10-symbols:GSTF7
UniGene:At.20350UniGene:At.23846UniGene:At.71571UniProt:Q9SRY5
Coordinates (TAIR10) chr1:-:658886..659705
Molecular Weight (calculated) 23599.40 Da
IEP (calculated) 6.61
GRAVY (calculated) -0.21
Length 209 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGIKVFGHP ASTATRRVLI ALHEKNLDFE FVHIELKDGE HKKEPFIFRN PFGKVPAFED GDFKLFESRA ITQYIAHFYS DKGNQLVSLG SKDIAGIAMG
101: IEIESHEFDP VGSKLVWEQV LKPLYGMTTD KTVVEEEEAK LAKVLDVYEH RLGESKYLAS DKFTLVDLHT IPVIQYLLGT PTKKLFDERP HVSAWVADIT
201: SRPSAKKVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)