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AT1G80860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.790
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phospholipid N-methyltransferase
Curator
Summary (TAIR10)
Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine.
Computational
Description (TAIR10)
phospholipid N-methyltransferase (PLMT); CONTAINS InterPro DOMAIN/s: Phospholipid methyltransferase (InterPro:IPR007318); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G80860-MONOMERBRENDA:2.1.1.71EC:2.1.1.71eggNOG:ENOG410IWMT
eggNOG:ENOG4111JRBEMBL:AC011713EMBL:AK118709EMBL:BT043493
EMBL:CP002684EnsemblPlants:AT1G80860EnsemblPlants:AT1G80860.1EnsemblPlants:AT1G80860.2
entrez:844425GeneID:844425Genevisible:Q9SAH5GO:GO:0000773
GO:GO:0005789GO:GO:0006656GO:GO:0008654GO:GO:0016021
GO:GO:0043231GO:GO:0080101Gramene:AT1G80860.1Gramene:AT1G80860.2
gramene_pathway:2.1.1.71gramene_pathway:PWY4FS-3gramene_pathway:PWY4FS-4hmmpanther:PTHR15458
InParanoid:Q9SAH5InterPro:IPR007318InterPro:IPR024960KEGG:00564+2.1.1.17
KEGG:00564+2.1.1.71KEGG:ath:AT1G80860KO:K00550OMA:LSWVPFQ
PANTHER:PTHR15458PaxDb:Q9SAH5Pfam:PF04191Pfam:Q9SAH5
PhylomeDB:Q9SAH5PIR:C96841PRIDE:Q9SAH5PRO:PR:Q9SAH5
ProteinModelPortal:Q9SAH5Proteomes:UP000006548RefSeq:NP_565246.1RefSeq:NP_849916.2
STRING:3702.AT1G80860.1TAIR:AT1G80860tair10-symbols:ATPLMTtair10-symbols:PLMT
TMHMM:TMhelixUniGene:At.33872UniPathway:UPA00753UniProt:Q9SAH5
Coordinates (TAIR10) chr1:-:30388432..30389284
Molecular Weight (calculated) 18820.10 Da
IEP (calculated) 9.04
GRAVY (calculated) 0.43
Length 164 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLLAAIGVL LPFPFYWWLW TNAQSWVNLC GRERDPSTVM ARVSHVLKAA QLLSLFSVAS LSWPPPLYFW PLMAFGQFLN FRVYQLLGEA GTYYGVRFGK
101: NIPWVTEFPF GVIRDPQYVG SIMSLLACLS WVPFQYILLW SLGYVFMMFL ESKEDPNARA KSIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)