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AT1G80830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : natural resistance-associated macrophage protein 1
Curator
Summary (TAIR10)
Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.
Computational
Description (TAIR10)
natural resistance-associated macrophage protein 1 (NRAMP1); CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: NRAMP metal ion transporter 6 (TAIR:AT1G15960.1); Has 5566 Blast hits to 5511 proteins in 1695 species: Archae - 118; Bacteria - 4154; Metazoa - 357; Fungi - 273; Plants - 337; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink).
Protein Annotations
BioGrid:29640eggNOG:COG1914eggNOG:KOG1291EMBL:AC011713
EMBL:AF165125EMBL:AF181687EMBL:AY086428EMBL:AY128347
EMBL:BT029300EMBL:CP002684EnsemblPlants:AT1G80830EnsemblPlants:AT1G80830.1
entrez:844422GeneID:844422Genevisible:Q9SAH8GO:GO:0005381
GO:GO:0005384GO:GO:0005886GO:GO:0015086GO:GO:0016021
GO:GO:0034755GO:GO:0055071GO:GO:0055072GO:GO:0070574
GO:GO:0071421Gramene:AT1G80830.1HAMAP:MF_00221hmmpanther:PTHR11706
hmmpanther:PTHR11706:SF33HOGENOM:HOG000152203InParanoid:Q9SAH8InterPro:IPR001046
KEGG:ath:AT1G80830OMA:AYKPNGSPANTHER:PTHR11706PaxDb:Q9SAH8
Pfam:PF01566Pfam:Q9SAH8PhylomeDB:Q9SAH8PIR:H96840
PRIDE:Q9SAH8PRINTS:PR00447PRO:PR:Q9SAH8ProteinModelPortal:Q9SAH8
Proteomes:UP000006548RefSeq:NP_178198.1SMR:Q9SAH8STRING:3702.AT1G80830.1
TAIR:AT1G80830tair10-symbols:ATNRAMP1tair10-symbols:NRAMP1tair10-symbols:PMIT1
TCDB:2.A.55.2.4TIGRfam:TIGR01197TIGRFAMs:TIGR01197TMHMM:TMhelix
UniGene:At.11579UniGene:At.70621UniProt:Q9SAH8
Coordinates (TAIR10) chr1:-:30373066..30375644
Molecular Weight (calculated) 57565.50 Da
IEP (calculated) 8.71
GRAVY (calculated) 0.66
Length 532 amino acids
Sequence (TAIR10)
(BLAST)
001: MAATGSGRSQ FISSSGGNRS FSNSPLIENS DSNQIIVSEK KSWKNFFAYL GPGFLVSIAY IDPGNFETDL QAGAHYKYEL LWIILVASCA ALVIQSLAAN
101: LGVVTGKHLA EQCRAEYSKV PNFMLWVVAE IAVVACDIPE VIGTAFALNM LFSIPVWIGV LLTGLSTLIL LALQKYGVRK LEFLIAFLVF TIAICFFVEL
201: HYSKPDPGEV LHGLFVPQLK GNGATGLAIS LLGAMVMPHN LFLHSALVLS RKIPRSASGI KEACRFYLIE SGLALMVAFL INVSVISVSG AVCNAPNLSP
301: EDRANCEDLD LNKASFLLRN VVGKWSSKLF AIALLASGQS STITGTYAGQ YVMQGFLDLR LEPWLRNLLT RCLAIIPSLI VALIGGSAGA GKLIIIASMI
401: LSFELPFALV PLLKFTSCKT KMGSHVNPMA ITALTWVIGG LIMGINIYYL VSSFIKLLIH SHMKLILVVF CGILGFAGIA LYLAAIAYLV FRKNRVATSL
501: LISRDSQNVE TLPRQDIVNM QLPCRVSTSD VD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)