AT1G77660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Histone H3 K4-specific methyltransferase SET7/9 family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Histone H3 K4-specific methyltransferase SET7/9 family protein; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: Histone H3 K4-specific methyltransferase SET7/9 family protein (TAIR:AT1G21920.1); Has 25589 Blast hits to 6526 proteins in 562 species: Archae - 0; Bacteria - 3550; Metazoa - 4135; Fungi - 204; Plants - 2355; Viruses - 0; Other Eukaryotes - 15345 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29186073..29187500 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47734.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.56 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.60 | ||||||||||||||||||||||||||||||||
| Length | 421 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSQKKLTRTQ SSLLRSSPTI RSSIQSLSSI TECDDFNETS HHRREQDLEA GEKEEKQRRR KPVKSFGSMN RIKPGLAFTL ACLSFLSLSS FLLFFVDEIF 101: TSENLLLGLI FVALALFFAS RNMAVINQTV IAIKQIRVRS RIKHKPKPVQ WYIGDSKPEP IKEEETRLVV KEGVQFFSNG DFYEGEFNRG KCNGSGVYYY 201: YVNGRYEGDW INGRYDGYGI ECWSKGSKYK GQYKQGLRHG FGVYWFYTGD SYSGEWFNGQ SHGFGVQTCA DGSSFVGEFK FGVKHGLGSY HFRNGDKYAG 301: EYFGDKIHGF GVYHFANGHY YEGAWHEGRK QGYGTYRFRT GDIKSGEWDD GNLVNHLPLD SDPVRRAVQS ARERAKNGVN QRRIDEQVIR AVAAANKAAT 401: AARVAAVKAV QNQMDGKICD N |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)