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AT1G76730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NagB/RpiA/CoA transferase-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NagB/RpiA/CoA transferase-like superfamily protein; FUNCTIONS IN: catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5-formyltetrahydrofolate cyclo-ligase (InterPro:IPR002698); Has 415 Blast hits to 415 proteins in 174 species: Archae - 92; Bacteria - 129; Metazoa - 119; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0212eggNOG:KOG4410EMBL:AC010718EMBL:AK119107
EMBL:BT024883EMBL:CP002684EnsemblPlants:AT1G76730EnsemblPlants:AT1G76730.1
entrez:844007Gene3D:3.40.50.10420GeneID:844007Genevisible:Q9SRE0
GO:GO:0005524GO:GO:0009507Gramene:AT1G76730.1hmmpanther:PTHR13017
hmmpanther:PTHR13017:SF0HOGENOM:HOG000222847InParanoid:Q9SRE0InterPro:IPR002698
InterPro:IPR024185KEGG:ath:AT1G76730KO:K01934ncoils:Coil
OMA:DPRPVHHPaxDb:Q9SRE0Pfam:PF01812Pfam:Q9SRE0
PhylomeDB:Q9SRE0PIR:G96795PRIDE:Q9SRE0PRO:PR:Q9SRE0
ProteinModelPortal:Q9SRE0Proteomes:UP000006548RefSeq:NP_565139.1STRING:3702.AT1G76730.1
SUPFAM:SSF100950TAIR:AT1G76730UniGene:At.34623UniProt:Q9SRE0
Coordinates (TAIR10) chr1:-:28803033..28804703
Molecular Weight (calculated) 39561.10 Da
IEP (calculated) 9.97
GRAVY (calculated) -0.36
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MIRLSPGFAI NPRFRSDSFV NSQKPPFLSV QIGSQRRNLS RIGSENGDGV AFDAVAYEAD RLSLDAAAME DMAETAKKEL ESDPDSDPKA WKWVIRKKMW
101: DLMEARNYAM SPRPVHHRIP NFVGASAAAR KLAELDAFRM AMVVKVNPDS PQKQIRFLTL SGEKKLLTPQ PRLRTGFFSV LESDLLKPET IMEACTSVGV
201: AKYGRAIGLD EKIKVDLIVI GSVAVNPQTG ARLGKGEGFA ELEYGMLRYM GAIDDSTPVV TTVHDCQLVD DIPLEKLAIH DVPVDIICTP TRVIFTNTPI
301: PKPQGIYWDK LSPEKLRQIR ILRELKNRLE KKTGRKLPTG PSEKLPPTAE RKRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)