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AT1G73380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZJ6FeggNOG:KOG4529EMBL:AC012396EMBL:AY035173
EMBL:AY117259EMBL:CP002684EnsemblPlants:AT1G73380EnsemblPlants:AT1G73380.1
entrez:843673GeneID:843673Gramene:AT1G73380.1hmmpanther:PTHR13379
HOGENOM:HOG000243506InterPro:IPR010733KEGG:ath:AT1G73380OMA:DFACAFR
PANTHER:PTHR13379Pfam:PF07000PhylomeDB:Q9FX33PIR:D96760
Proteomes:UP000006548RefSeq:NP_565063.1STRING:3702.AT1G73380.1TAIR:AT1G73380
UniGene:At.16891UniGene:At.34994UniProt:Q9FX33
Coordinates (TAIR10) chr1:+:27589100..27590657
Molecular Weight (calculated) 47344.10 Da
IEP (calculated) 5.37
GRAVY (calculated) 0.04
Length 434 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIGEIEIAK QRCESVIRTI ENLPLSTAIT ASCRRTLLKL ASSELSFLSS LSSDPSPKPL SVNIGHIESV VRILQLPSIT GVSRVCKPIP LPIGGVHVDL
101: VCTLGKVPVW IIVSDRNPRY ISWNGDRHGS KGLRSRIEQI LAAANSTTTL KPSSVILFFA NGLPSSVYEK LKDEFGAVYF DFGFDSDSDS DISMLDDFDC
201: EWVNVVRTRS YKEAVSIEIK LIDQCDSLAS PETEVLVQAE VTELSQKDAF STVISSMRLL GEDCLINFDT TALVALVSGI SNGCAERLVD MPEIELEEKF
301: KGNTVFVIAQ ARSEIEKPGL VKVGTVLSGK RGIVCKSVFS EFKELVSMYA GPNEKLRAEQ LLKSLMVVND NPSERVMSLP TTRKLAMKNK TVFGTGDRWG
401: APTLTANMAF VRAVAQSGMS LSTIDHSPRA LTGD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)