AT1G71500.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Rieske (2Fe-2S) domain-containing protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Rieske (2Fe-2S) domain-containing protein; FUNCTIONS IN: oxidoreductase activity, 2 iron, 2 sulfur cluster binding; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Rieske [2Fe-2S] iron-sulphur domain (InterPro:IPR017941); Has 295 Blast hits to 295 proteins in 102 species: Archae - 0; Bacteria - 166; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:26936084..26937331 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 31728.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.01 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 287 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MATTASSSLP RNYSFTTPRP SSFIRGPPLA RTLPLYLRRN RRVALTYRLD QNSKQRSGGN VRCEATEVSS SSSVSTPGRN WVPVVPLSAL PKGERRVVIQ 101: DDETILLLWY KNDVFAIENR SPAEGAYSEG LLNARLTQDG CIVCPSTDST FDLRTGEIRE WYPKNPVLRV LTPALRKLFV YPVKYDEENI YISIRDSGKT 201: EAAAEIVFSG KAQPGLTATN VNVDEVRMIV DEGSEGFGFT KKNEVINGKA AVIGFLLLLD FELLTGKGLL KGTGFLDFLY SASDAFK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)