AT1G69500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.859 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 704, subfamily B, polypeptide 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a cytochrome P450, designated CYP704B1. Expressed in the developing anthers. Essential for pollen exine development. Mutations in CYP704B1 result in impaired pollen walls that lack a normal exine layer and exhibit a characteristic striped surface, termed zebra phenotype. Heterologous expression of CYP704B1 in yeast cells demonstrated that it catalyzes omega-hydroxylation of long-chain fatty acids, implicating these molecules in sporopollenin synthesis. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 704, subfamily B, polypeptide 1 (CYP704B1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 2 (TAIR:AT2G45510.1); Has 24652 Blast hits to 24553 proteins in 1381 species: Archae - 44; Bacteria - 2338; Metazoa - 9085; Fungi - 5048; Plants - 7257; Viruses - 3; Other Eukaryotes - 877 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26123960..26125909 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60104.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.92 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 524 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLCLVIACM VTSWIFLHRW GQRNKSGPKT WPLVGAAIEQ LTNFDRMHDW LVEYLYNSRT VVVPMPFTTY TYIADPINVE YVLKTNFSNY PKGETYHSYM 101: EVLLGDGIFN SDGELWRKQR KTASFEFASK NLRDFSTVVF KEYSLKLFTI LSQASFKEQQ VDMQELLMRM TLDSICKVGF GVEIGTLAPE LPENHFAKAF 201: DTANIIVTLR FIDPLWKMKK FLNIGSEALL GKSIKVVNDF TYSVIRRRKA ELLEAQISPT NNNNNNNNKV KHDILSRFIE ISDDPDSKET EKSLRDIVLN 301: FVIAGRDTTA TTLTWAIYMI MMNENVAEKL YSELQELEKE SAEATNTSLH QYDTEDFNSF NEKVTEFAGL LNYDSLGKLH YLHAVITETL RLYPAVPQDP 401: KGVLEDDMLP NGTKVKAGGM VTYVPYSMGR MEYNWGSDAA LFKPERWLKD GVFQNASPFK FTAFQAGPRI CLGKDSAYLQ MKMAMAILCR FYKFHLVPNH 501: PVKYRMMTIL SMAHGLKVTV SRRS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)