AT1G69060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Chaperone DnaJ-domain superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); Has 3526 Blast hits to 2426 proteins in 300 species: Archae - 4; Bacteria - 245; Metazoa - 1133; Fungi - 271; Plants - 159; Viruses - 2; Other Eukaryotes - 1712 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25965055..25967273 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 71390.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.52 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.98 | ||||||||||||||||||||||||||||||||
| Length | 630 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRSIYVHRKE VMGENRQIRS RSWNRMPTKR CSANGIMEEF ILVDDDDVII LDFPESSKRK APGTSRTRKE SIMPRVISID DDDDETENVQ KAGSSSSGNL 101: QTSAEVDNDD CQFIQEKCAT FRFSKCKQTF STMPSHGIRF GLGSDTYSDF SESDCSDCEI LEGSHRDVRE QWEQAALLRK MKKAGKAGLS EEAGPSNLHC 201: DTNFEPGFER RTEQHDQTSF FFAARNPDGG KAGLTEEAGP SNLHCDNNFR PGFESRTEQH DQTSFFFTAS NPDGEKETSS TFFGADGRIP DMTTYFGSVM 301: EEDNQAKHTA NSTFSSKEDF RGPSPLSPGI RVEHERFDTP PTHFTSPKEP IHQTSFKKVV EQPNKVQVQC ETSLSPEENQ NKNVAYQSYT KEVEEEEDAS 401: KLSPPQTSNG YGDTTHVFGT QSNGARCEHG ISLDESREPI IDPIPSTSGQ VQGTNGTAPA IDVMLNREIL KETDEYKRAQ EEEWESRQRQ LQIQADEAQK 501: QRKRRKLENM RKLEMERRQK ERVEEVRETQ KKDEENMNMK EKVRAEITKS LKLLELKSFN MAALLRGLGI QVGGGISPLP NEVHAAYKRA VLKFHPDRAS 601: RGGDIKQQVE AEEKFKLIAR MKDKFKLIAP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)