AT1G68690.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: proline-rich extensin-like receptor kinase 10 (TAIR:AT1G26150.1); Has 570812 Blast hits to 252659 proteins in 6239 species: Archae - 1199; Bacteria - 114498; Metazoa - 211977; Fungi - 79751; Plants - 80044; Viruses - 11567; Other Eukaryotes - 71776 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:25789192..25791886 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 75131.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 708 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MATTPVQPPV SNSPPVTSPP PPLNNATSPA TPPPVTSPLP PSAPPPNRAP PPPPPVTTSP PPVANGAPPP PLPKPPESSS PPPQPVIPSP PPSTSPPPQP 101: VIPSPPPSAS PPPALVPPLP SSPPPPASVP PPRPSPSPPI LVRSPPPSVR PIQSPPPPPS DRPTQSPPPP SPPSPPSERP TQSPPSPPSE RPTQSPPPPS 201: PPSPPSDRPS QSPPPPPEDT KPQPPRRSPN SPPPTFSSPP RSPPEILVPG SNNPSQNNPT LRPPLDAPNS TNNSGIGTGA VVGISVAVAL VVFTLFGIFV 301: WCLRKREKRL SAVSGGDVTP SPMSSTARSD SAFFRMQSSA PVGASKRSGS YQSQSGGLGN SKALFSYEEL VKATNGFSQE NLLGEGGFGC VYKGILPDGR 401: VVAVKQLKIG GGQGDREFKA EVETLSRIHH RHLVSIVGHC ISGDRRLLIY DYVSNNDLYF HLHGEKSVLD WATRVKIAAG AARGLAYLHE DCHPRIIHRD 501: IKSSNILLED NFDARVSDFG LARLALDCNT HITTRVIGTF GYMAPEYASS GKLTEKSDVF SFGVVLLELI TGRKPVDTSQ PLGDESLVEW ARPLISHAIE 601: TEEFDSLADP KLGGNYVESE MFRMIEAAGA CVRHLATKRP RMGQIVRAFE SLAAEDLTNG MRLGESEVFN SAQQSAEIRL FRRMAFGSQN YSTDFFSHSS 701: YNSRDANV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)