suba logo
AT1G67890.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.580
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PAS domain-containing protein tyrosine kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PAS domain-containing protein tyrosine kinase family protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: PAS domain-containing protein tyrosine kinase family protein (TAIR:AT5G49470.3); Has 128751 Blast hits to 126912 proteins in 4876 species: Archae - 309; Bacteria - 16105; Metazoa - 47584; Fungi - 11405; Plants - 33369; Viruses - 523; Other Eukaryotes - 19456 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG0192EMBL:CP002684EnsemblPlants:AT1G67890
EnsemblPlants:AT1G67890.1entrez:843117ExpressionAtlas:F4HVH9GeneID:843117
GO:GO:0004672GO:GO:0004712GO:GO:0005524GO:GO:0006355
GO:GO:0009749GO:GO:0009789GO:GO:0010231Gramene:AT1G67890.1
hmmpanther:PTHR23257hmmpanther:PTHR23257:SF485InParanoid:F4HVH9InterPro:IPR000014
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013767ncoils:CoilOMA:PANNENMPaxDb:F4HVH9
Pfam:PF00989Pfam:PF07714Pfscan:PS50011Pfscan:PS50112
PRIDE:F4HVH9PRINTS:PR00109PROSITE:PS00108PROSITE:PS50011
PROSITE:PS50112ProteinModelPortal:F4HVH9Proteomes:UP000006548RefSeq:NP_564913.1
scanprosite:PS00108SMART:SM00091SMART:SM00220SMR:F4HVH9
STRING:3702.AT1G67890.1SUPFAM:SSF55785SUPFAM:SSF56112TAIR:AT1G67890
TIGRfam:TIGR00229TIGRFAMs:TIGR00229UniGene:At.24453UniProt:F4HVH9
Coordinates (TAIR10) chr1:+:25457345..25462436
Molecular Weight (calculated) 85222.20 Da
IEP (calculated) 7.77
GRAVY (calculated) -0.62
Length 765 amino acids
Sequence (TAIR10)
(BLAST)
001: MENPNPPAEK LLKKIRELEE SQEDLKREMS KLKVSAEIKR RSHSSSPKRP SRRNSGEGTP LWRKTGAASF RHASPLRKES HSKDGVAGGG DGPSAGKFTD
101: KQYLNILQSM AQAVHVFDLN GQIIFWNSMA EKLYGFSAAE ALGKDSINIL VDGQDAAVAK NIFQRCSSGE SWTGEFPVKN KMGERFSVVT TISPFYDDDG
201: LLIGIICITN DSALFQRPRV PPAKNRWQEG DSSFCRGTNG VASRLGFDSK EAVVSKLGLD SQQPIQAAIA SKISDLASKV GNKVRSKMRA GDNNASHPEG
301: GNGGSHQSDQ GFFDAAFSDQ REDAETNDAS TPRGNLIQSP FGVFLCNDDK SSSKASGESN DENDRNSVVP KKLTSKTEEW MVKKGLSWPW KGNEREGLER
401: RNAHSVWPWV HNEQQKEEAH HSNSYNSVKS ESLASESNKP ANNENMGSVN VNSASSASSC GSTSSSVMNK VDMDSDCLDY EILWEDLTIG EQIGQGSCGT
501: VYHGLWFGSD VAVKVFSKQE YSEEIITSFK QEVSLMKRLR HPNVLLFMGA VASPQRLCIV TEFLPRGSLF RLLQRNKSKL DLRRRIHMAS DIARGMNYLH
601: HCSPPIIHRD LKSSNLLVDR NWTVKVADFG LSRIKHETYL TTNGRGTPQW MAPEVLRNEA ADEKSDVYSF GVVLWELVTE KIPWENLNAM QVIGAVGFMN
701: QRLEVPKDVD PQWIALMESC WHSEPQCRPS FQELMDKLRE LQRKYTIQFQ AARAASIDNS SLKEK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)