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AT1G65840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : polyamine oxidase 4
Curator
Summary (TAIR10)
encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.
Computational
Description (TAIR10)
polyamine oxidase 4 (PAO4); CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 7028 Blast hits to 6613 proteins in 1153 species: Archae - 127; Bacteria - 2858; Metazoa - 1453; Fungi - 590; Plants - 766; Viruses - 0; Other Eukaryotes - 1234 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G65840-MONOMERBioCyc:MetaCyc:AT1G65840-MONOMERBRENDA:1.5.3.16EC:1.5.3.16
eggNOG:ENOG410XSNCeggNOG:KOG0029EMBL:AC007234EMBL:AF364953
EMBL:AF370508EMBL:BT000353EMBL:CP002684EnsemblPlants:AT1G65840
EnsemblPlants:AT1G65840.1entrez:842894Gene3D:3.40.50.720GeneID:842894
Genevisible:Q8H191GO:GO:0005777GO:GO:0006598GO:GO:0046592
GO:GO:0052894GO:GO:0052895GO:GO:0052901Gramene:AT1G65840.1
gramene_pathway:1.5.3.16gramene_pathway:PWY-6441hmmpanther:PTHR10742hmmpanther:PTHR10742:SF228
HOGENOM:HOG000037651InParanoid:Q8H191InterPro:IPR001613InterPro:IPR002937
InterPro:IPR016040InterPro:IPR023753KEGG:ath:AT1G65840KO:K17839
OMA:GARWLHNPaxDb:Q8H191Pfam:PF01593Pfam:Q8H191
PhylomeDB:Q8H191PIR:D96682PRIDE:Q8H191PRINTS:PR00757
PRO:PR:Q8H191ProteinModelPortal:Q8H191Proteomes:UP000006548RefSeq:NP_176759.1
SMR:Q8H191STRING:3702.AT1G65840.1SUPFAM:SSF51905SUPFAM:SSF54373
TAIR:AT1G65840tair10-symbols:ATPAO4tair10-symbols:PAO4UniGene:At.16379
UniProt:Q8H191
Coordinates (TAIR10) chr1:+:24490173..24492728
Molecular Weight (calculated) 54933.90 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.10
Length 497 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)