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AT1G64690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : branchless trichome
Curator
Summary (TAIR10)
Encodes BRANCHLESS TRICHOME (BLT) involved in trichome development. A large portion of the internal amino acid sequence of BLT is predicted to form a coiled-coil domain. BLT mutants form branchless trichomes with blunt tips.
Computational
Description (TAIR10)
BRANCHLESS TRICHOME (BLT); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 8499 Blast hits to 5324 proteins in 475 species: Archae - 37; Bacteria - 382; Metazoa - 3924; Fungi - 509; Plants - 391; Viruses - 45; Other Eukaryotes - 3211 (source: NCBI BLink).
Protein Annotations
BioGrid:27998eggNOG:ENOG410IX4SeggNOG:ENOG410YRSNEMBL:AC006193
EMBL:AC009519EMBL:BT010723EMBL:BT010991EMBL:CP002684
EnsemblPlants:AT1G64690EnsemblPlants:AT1G64690.1entrez:842777GeneID:842777
Genevisible:F4I878GO:GO:0010090GO:GO:0010091Gramene:AT1G64690.1
hmmpanther:PTHR31071hmmpanther:PTHR31071:SF10HOGENOM:HOG000090372InParanoid:F4I878
IntAct:F4I878KEGG:ath:AT1G64690ncoils:CoilOMA:GGGENPH
PaxDb:F4I878Pfam:F4I878PIR:A96670PRIDE:F4I878
PRO:PR:F4I878ProteinModelPortal:F4I878Proteomes:UP000006548RefSeq:NP_176650.1
STRING:3702.AT1G64690.1TAIR:AT1G64690tair10-symbols:BLTUniGene:At.35972
UniProt:F4I878
Coordinates (TAIR10) chr1:+:24038069..24038890
Molecular Weight (calculated) 32600.70 Da
IEP (calculated) 10.05
GRAVY (calculated) -1.06
Length 273 amino acids
Sequence (TAIR10)
(BLAST)
001: MKDMKMQSSP ETMMTRIPTP DPHSTGVRED AMDSVCKPWK LYENPYYCSS QSQQHQHQRK AFIWDLNFIK VFMESELGKA QDEIKELKAE LDYERKARRR
101: AELMIKKLAK DVEEERMARE AEEMQNKRLF KELSSEKSEM VRMKRDLEEE RQMHRLAEVL REERVQMKLM DARLFLEEKL SELEEANRQG ERERNRMMKP
201: KILERACSSP ARRRCENPQI KRGINPFPRV MRAIRSKSEK WGSKLECQKV QLKILLRQKT TPRCTPLLSS PPP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)