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AT1G69080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G03720.1); Has 185 Blast hits to 185 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 178; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWRJeggNOG:ENOG410Y9VREMBL:AC008262EMBL:BT024838
EMBL:CP002684EnsemblPlants:AT1G69080EnsemblPlants:AT1G69080.1entrez:843240
ExpressionAtlas:Q9LQB2Gene3D:3.40.50.620GeneID:843240GO:GO:0006950
GO:GO:0016787Gramene:AT1G69080.1hmmpanther:PTHR31964hmmpanther:PTHR31964:SF39
InterPro:IPR006016InterPro:IPR014729KEGG:ath:AT1G69080OMA:CSEAKNA
Pfam:PF00582PhylomeDB:Q9LQB2Proteomes:UP000006548RefSeq:NP_564951.1
SUPFAM:SSF52402TAIR:AT1G69080UniGene:At.43260UniProt:Q9LQB2
Coordinates (TAIR10) chr1:-:25972132..25973243
Molecular Weight (calculated) 24956.20 Da
IEP (calculated) 10.12
GRAVY (calculated) -0.49
Length 223 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKKGEGFFV SRLRANVRVQ PPTTTSQHGC SHEPPTTSIE IKGRRIIVVV DSCSEAKNAL LWTLSHCAQP QDSILLLHFL KAKTSQSGDL ANKEEGEDES
101: CDKPTTSRAD KKVSALKTMC ELKRPEVKTE VVFVKGDEKG PTIVKEARER EASLLVLGQK KQHATWRLLM VWASQARPVT KHDFVEYCIN NSPCMAIAVR
201: KRGKKLGGYT LTTKRHKDFW LLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)