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AT1G64110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G28000.1); Has 45691 Blast hits to 43156 proteins in 3301 species: Archae - 1573; Bacteria - 21964; Metazoa - 5046; Fungi - 3902; Plants - 3262; Viruses - 32; Other Eukaryotes - 9912 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1407-MONOMEReggNOG:COG0464eggNOG:KOG0737EMBL:AY056097
EMBL:BT006360EMBL:CP002684EnsemblPlants:AT1G64110EnsemblPlants:AT1G64110.1
entrez:842716ExpressionAtlas:Q940D1Gene3D:3.40.50.300GeneID:842716
GO:GO:0005524GO:GO:0016787Gramene:AT1G64110.1hmmpanther:PTHR23074
hmmpanther:PTHR23074:SF90HOGENOM:HOG000225144InterPro:IPR003593InterPro:IPR003959
InterPro:IPR003960InterPro:IPR027417Pfam:PF00004PhylomeDB:Q940D1
PROSITE:PS00674Proteomes:UP000006548RefSeq:NP_564824.1scanprosite:PS00674
SMART:SM00382SMR:Q940D1STRING:3702.AT1G64110.2SUPFAM:SSF52540
TAIR:AT1G64110UniGene:At.16450UniProt:Q940D1
Coordinates (TAIR10) chr1:-:23796887..23801240
Molecular Weight (calculated) 91965.80 Da
IEP (calculated) 6.82
GRAVY (calculated) -0.44
Length 824 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLSALGVGV GVGVGLGLAS GQAVGKWAGG NSSSNNAVTA DKMEKEILRQ VVDGRESKIT FDEFPYYLSE QTRVLLTSAA YVHLKHFDAS KYTRNLSPAS
101: RAILLSGPAE LYQQMLAKAL AHFFDAKLLL LDVNDFALKI QSKYGSGNTE SSSFKRSPSE SALEQLSGLF SSFSILPQRE ESKAGGTLRR QSSGVDIKSS
201: SMEGSSNPPK LRRNSSAAAN ISNLASSSNQ VSAPLKRSSS WSFDEKLLVQ SLYKVLAYVS KANPIVLYLR DVENFLFRSQ RTYNLFQKLL QKLSGPVLIL
301: GSRIVDLSSE DAQEIDEKLS AVFPYNIDIR PPEDETHLVS WKSQLERDMN MIQTQDNRNH IMEVLSENDL ICDDLESISF EDTKVLSNYI EEIVVSALSY
401: HLMNNKDPEY RNGKLVISSI SLSHGFSLFR EGKAGGREKL KQKTKEESSK EVKAESIKPE TKTESVTTVS SKEEPEKEAK AEKVTPKAPE VAPDNEFEKR
501: IRPEVIPAEE INVTFKDIGA LDEIKESLQE LVMLPLRRPD LFTGGLLKPC RGILLFGPPG TGKTMLAKAI AKEAGASFIN VSMSTITSKW FGEDEKNVRA
601: LFTLASKVSP TIIFVDEVDS MLGQRTRVGE HEAMRKIKNE FMSHWDGLMT KPGERILVLA ATNRPFDLDE AIIRRFERRI MVGLPAVENR EKILRTLLAK
701: EKVDENLDYK ELAMMTEGYT GSDLKNLCTT AAYRPVRELI QQERIKDTEK KKQREPTKAG EEDEGKEERV ITLRPLNRQD FKEAKNQVAA SFAAEGAGMG
801: ELKQWNELYG EGGSRKKEQL TYFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)