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AT5G66400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.373
nucleus 0.338
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Dehydrin family protein
Curator
Summary (TAIR10)
Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.
Computational
Description (TAIR10)
RESPONSIVE TO ABA 18 (RAB18); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cold acclimation, response to water deprivation, response to 1-Aminocyclopropane-1-carboxylic Acid, response to abscisic acid stimulus, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: dehydrin xero 1 (TAIR:AT3G50980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
DisProt:DP00689eggNOG:ENOG410JPMWeggNOG:ENOG410Z1YHEMBL:AB013389
EMBL:AF428458EMBL:AY093779EMBL:BT002226EMBL:CP002688
EMBL:L04173EMBL:X68042EnsemblPlants:AT5G66400EnsemblPlants:AT5G66400.1
entrez:836772ExpressionAtlas:P30185GeneID:836772Genevisible:P30185
GO:GO:0005829GO:GO:0009414GO:GO:0009631GO:GO:0009737
GO:GO:0009961hmmpanther:PTHR33346InParanoid:P30185InterPro:IPR000167
InterPro:IPR030513OMA:GHHDQSSPaxDb:P30185Pfam:P30185
Pfam:PF00257PIR:S28021PRIDE:P30185PRO:PR:P30185
PROSITE:PS00315PROSITE:PS00823Proteomes:UP000006548RefSeq:NP_201441.1
scanprosite:PS00315scanprosite:PS00823STRING:3702.AT5G66400.1TAIR:AT5G66400
tair10-symbols:ATDI8tair10-symbols:RAB18UniGene:At.20221UniGene:At.74882
UniProt:P30185
Coordinates (TAIR10) chr5:-:26518511..26519153
Molecular Weight (calculated) 18465.00 Da
IEP (calculated) 7.95
GRAVY (calculated) -1.18
Length 186 amino acids
Sequence (TAIR10)
(BLAST)
001: MASYQNRPGG QATDEYGNPI QQQYDEYGNP MGGGGYGTGG GGGATGGQGY GTGGQGYGSG GQGYGTGGQG YGTGTGTEGF GTGGGARHHG QEQLHKESGG
101: GLGGMLHRSG SGSSSSSEDD GQGGRRKKGI TQKIKEKLPG HHDQSGQAQA MGGMGSGYDA GGYGGEHHEK KGMMDKIKEK LPGGGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)