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AT1G63670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF3741)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 703 Blast hits to 632 proteins in 148 species: Archae - 5; Bacteria - 69; Metazoa - 168; Fungi - 50; Plants - 149; Viruses - 4; Other Eukaryotes - 258 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J9K1eggNOG:ENOG41116RBEMBL:AC011622EMBL:CP002684
EnsemblPlants:AT1G63670EnsemblPlants:AT1G63670.1EnsemblPlants:AT1G63670.2EnsemblPlants:AT1G63670.3
entrez:842671GeneID:842671Gramene:AT1G63670.1Gramene:AT1G63670.2
Gramene:AT1G63670.3hmmpanther:PTHR21726hmmpanther:PTHR21726:SF38HOGENOM:HOG000152237
InterPro:IPR022212InterPro:IPR025486KEGG:ath:AT1G63670ncoils:Coil
OMA:DLIHETMPfam:PF12552Pfam:PF14309PhylomeDB:Q9CAD2
PIR:F96661Proteomes:UP000006548RefSeq:NP_001077766.1RefSeq:NP_001077767.1
RefSeq:NP_176554.1STRING:3702.AT1G63670.1TAIR:AT1G63670UniGene:At.36094
UniProt:Q9CAD2
Coordinates (TAIR10) chr1:-:23607527..23610003
Molecular Weight (calculated) 79484.10 Da
IEP (calculated) 6.91
GRAVY (calculated) -0.78
Length 689 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKKRSPRSS KSPGPAIFPK SPLVYESYKS GCGWKLIKFF DFGHVKSGNK RLGSEKKKFV RDSAGNVYTK SQLDLLKKLH EKCQCNDRIV EEERSCKPKT
101: RRRSLSSDRE LEKYESKPVQ GLLEREIRRI KNLKDETCDV PDKQKQSSLS EIENDSDKQM DMKNGRDCKK SSEINLQACV NEAAETFICS KAEEKGKDRS
201: KQFMEALDIL SSNKELFITL LQDPHSFSAK KSLDLEGSKV KEPRDKSPSM ADDLDSIVLL KPRLSSSVDD KVYLRFKHLA KKLKLVVGSN KDSNHAENKP
301: EGSSRGREIE AAAFRTSDVS TSTVGHRSPE SPVFRRKKRV ESDVFKLSIE NDVLPRRFMV ERQQERLNSS PVYEVPYALS SLQTKLKERR QKLEKKRESF
401: KLWSLDKNFE VFDPNPYNSN LRFLENNCTG SSEYKSLRTH VEDGFVEDRY LESSLAETNL SLERQDCNIH DPKQEQEQPS PVSVLERIHL EDETVIPGNV
501: KISNLEEKIG LSFDDPNIDL IEKESVHEFV KKVLEASRLN WTNLMARCNE DTSLLDEFSH GSHNDQLLLV LDYTDEILRE IYRQDIKFWP FSPSKSSRVL
601: NLESSLREDD LIHETMRHFD WSLLCSDSPT RSLDQIIETD LIKPCLWLDF GGESEGVVSD IVEKIQQQLV LEISHELRTM QRSILCRLI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)