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AT1G62225.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62000.1); Has 41 Blast hits to 41 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC000375EMBL:AK118097EMBL:AY065307EMBL:BT030612
EMBL:CP002684EnsemblPlants:AT1G62225EnsemblPlants:AT1G62225.1entrez:842519
GeneID:842519Gramene:AT1G62225.1HOGENOM:HOG000113940KEGG:ath:AT1G62225
OMA:NTEYTNSPhylomeDB:O04588PIR:H96648Proteomes:UP000006548
RefSeq:NP_683458.1TAIR:AT1G62225TMHMM:TMhelixUniGene:At.28606
UniProt:O04588
Coordinates (TAIR10) chr1:-:22989850..22990281
Molecular Weight (calculated) 14324.30 Da
IEP (calculated) 11.09
GRAVY (calculated) 0.06
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MNAIKFVVLL LIGVVCVNVG AIRQLEKRSK ETELSVSLPK ATKGVGAEFT VTVYTQSIGD GNGFGDAKIK GRKGSSSNAI GSGSGITSGY VIAKGPNATA
101: FSRSIAFGLG QANAVAGRKG ATAKGNGFGR GITTAFGSTG PKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)