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AT1G61795.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.932
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PAK-box/P21-Rho-binding family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PAK-box/P21-Rho-binding family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: ROP-interactive CRIB motif-containing protein 10 (TAIR:AT4G04900.1); Has 175 Blast hits to 175 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 175; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC005882EMBL:AK228428EMBL:CP002684EMBL:DQ487454
EMBL:DQ652616EnsemblPlants:AT1G61795EnsemblPlants:AT1G61795.1entrez:5007827
Gene3D:3.90.810.10GeneID:5007827GO:GO:0005886GO:GO:0040008
Gramene:AT1G61795.1hmmpanther:PTHR23177hmmpanther:PTHR23177:SF8HOGENOM:HOG000239605
InParanoid:Q1G3Y0InterPro:IPR000095KEGG:ath:AT1G61795OMA:EFKTSNN
PaxDb:Q1G3Y0Pfam:PF00786Pfam:Q1G3Y0Pfscan:PS50108
PhylomeDB:Q1G3Y0PIR:H96643PRO:PR:Q1G3Y0PROSITE:PS50108
ProteinModelPortal:Q1G3Y0Proteomes:UP000006548RefSeq:NP_001077756.1SMART:SM00285
TAIR:AT1G61795UniGene:At.47375UniProt:Q1G3Y0
Coordinates (TAIR10) chr1:+:22819943..22820826
Molecular Weight (calculated) 14640.00 Da
IEP (calculated) 6.26
GRAVY (calculated) -0.72
Length 128 amino acids
Sequence (TAIR10)
(BLAST)
001: MATRFKGLYN KSFKCFSDIF DVEEEEEMEI GYPTDVRHVS HIGWDSSSSS APSWLHEFKT SNNVLEPNSS WPFQDLKSAM EAFGEVESSK EMERESTKQN
101: LKKKLSSKAS LLCNSWSPRF SRSSKVLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)