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AT1G59860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HSP20-like chaperones superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7002 Blast hits to 7001 proteins in 1594 species: Archae - 206; Bacteria - 4112; Metazoa - 148; Fungi - 313; Plants - 1631; Viruses - 0; Other Eukaryotes - 592 (source: NCBI BLink).
Protein Annotations
BioGrid:27505eggNOG:COG0071eggNOG:KOG0710EMBL:AC007258
EMBL:AK175148EMBL:AK175265EMBL:AY087202EMBL:BT024694
EMBL:CP002684EnsemblPlants:AT1G59860EnsemblPlants:AT1G59860.1entrez:842280
Gene3D:2.60.40.790GeneID:842280Genevisible:Q9XIE3GO:GO:0005737
GO:GO:0006457GO:GO:0006970GO:GO:0009408GO:GO:0009651
GO:GO:0051259Gramene:AT1G59860.1hmmpanther:PTHR11527hmmpanther:PTHR11527:SF158
HOGENOM:HOG000251751InParanoid:Q9XIE3InterPro:IPR002068InterPro:IPR008978
InterPro:IPR031107KEGG:ath:AT1G59860KO:K13993OMA:RINNTIF
PANTHER:PTHR11527PaxDb:Q9XIE3Pfam:PF00011Pfam:Q9XIE3
Pfscan:PS01031PhylomeDB:Q9XIE3PIR:G96622PRIDE:Q9XIE3
PRO:PR:Q9XIE3PROSITE:PS01031ProteinModelPortal:Q9XIE3Proteomes:UP000006548
RefSeq:NP_176195.1SMR:Q9XIE3STRING:3702.AT1G59860.1SUPFAM:SSF49764
TAIR:AT1G59860UniGene:At.36768UniProt:Q9XIE3
Coordinates (TAIR10) chr1:+:22031474..22031941
Molecular Weight (calculated) 17624.80 Da
IEP (calculated) 7.79
GRAVY (calculated) -0.68
Length 155 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLIPSFFGN NRRINNNIFD PFSLDVWDPF KELQFPSSSS SAIANARVDW KETAEAHVFK ADLPGMKKEE VKVEIEDDSV LKISGERHVE KEEKQDTWHR
101: VERSSGGFSR KFRLPENVKM DQVKASMENG VLTVTVPKVE TNKKKAQVKS IDISG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)