AT1G59650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF1336) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes CW14. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CW14; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT1G10410.1); Has 261 Blast hits to 261 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21920099..21922670 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55341.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.04 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||
| Length | 492 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGCVSTPKS CVGGKIRSSK RRKTRTRRKI QKKRVVSSSR LSDGSFDNNP TFRASVDEAW FDSNLAFETD CDDDFHSVQE DTLSVNGCER ISVSSMSSVK 101: DSNLGGSARN SLSDVISQSK SESALIDTKQ AVFIDEISSN ADGSSNKDEG LLENCGILPS NCLPCLNSTV PSIEKRRSLS SSPPSTRKKA AVKLSFKWRE 201: GHPTGPLFST TMQLQRPMAG SQVPFCPLEK KMFDSWSIIE PGSFRVRSKT YFRDKKKELA PNYAAYNPFG VDVFLSQRKV NHIAQYVELP VVTTTPTKLP 301: SILVVNVQIP LYPAAIFHGE TDGEGMNFVL YFKLSDNYLK ELPPHFQESI QRLLDDEVEK VRGYTTDTNV PFRERLKILG RVANVDDLQL NGAEKKLMNA 401: YNEKPVLSRP QHEFYSGENY FEIDIDMHRF SYISRKGFEA FLDRLKNCVL DVGLTIQGNK PEELPEQILC CIRLNGIDYM NYHQLALSQE VL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)