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AT1G58210.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : kinase interacting family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
EMBRYO DEFECTIVE 1674 (EMB1674); CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT1G09720.1); Has 30818 Blast hits to 19641 proteins in 1442 species: Archae - 565; Bacteria - 3414; Metazoa - 15518; Fungi - 2982; Plants - 1779; Viruses - 78; Other Eukaryotes - 6482 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJQPeggNOG:ENOG410Y9Y9EMBL:AC079131EMBL:AY093160
EMBL:BT002113EMBL:CP002684EnsemblPlants:AT1G58210EnsemblPlants:AT1G58210.1
entrez:842188ExpressionAtlas:Q8RWD7Genevisible:Q8RWD7GO:GO:0007275
hmmpanther:PTHR31631hmmpanther:PTHR31631:SF3InterPro:IPR015216iPTMnet:Q8RWD7
ncoils:CoilPaxDb:Q8RWD7Pfam:PF07765Pfam:PF09133
Pfscan:PS51774PRO:PR:Q8RWD7Proteomes:UP000006548STRING:3702.AT1G58210.1
TAIR:AT1G58210tair10-symbols:EMB1674UniGene:At.36906UniProt:Q8RWD7
UniProt:Q9C6Q9
Coordinates (TAIR10) chr1:+:21553621..21558056
Molecular Weight (calculated) 141004.00 Da
IEP (calculated) 5.30
GRAVY (calculated) -0.79
Length 1246 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTTTRAKSKF QSLSACRFTP LPEPNTSPST YSKTLPKPNS SPGTDGTFPT PFPLAVITPI KTLKSVTLSD WWLTKKGKDL CIKGFESNGA SGVRLFSSGT
0101: ISKRHESTTL EAIDGITISI NGFINRSRCL ENGISIEVCN RFRLGFPYDW EDYNEEEEEK KKKNVDISFD DIPVNRYQDL YSLEGCLKDK ILDDVVGSLR
0201: DLVCQKSDKA CEKSRVGDVD DDDDDDDDKS LVSRVVGVKT RGMLRRREEY EASIGKRVAT MSGKRVVTVS KKKNRRRSFG CSYVDDLAMF EPSSASSSLV
0301: QEKRCCREQR AMLIHGGGQA TYVQNNPNGS NTIFRVEYTL KIIDEDGDTF AKRAEMYYRK RPEIVNFVEE AFRSYRALAE RYDHLSRELQ SANRTIATAF
0401: PEHVQFPLED DSDENEDYDG RPRKPPKHLH LIPKGINIPE VPDIPKKKDF RSQSMMLSRK GPADLKRNVS SAQAKREAAI VRSGLSKEEG LEEIDKLQKG
0501: ILALQTEKEF VRSSYEESYE RYWDLENEVT EMQKSVCNLQ DEFGLGASID DSDARTLMAS TALSSCRDTL AKLEEKQKIS IEEAEIEKGR ITTAKERFYA
0601: LRNKFEKPES DVLDEVIRTD EEEEDVVQES SYESEREDSN ENLTVVKLAE KIDDLVHRVV SLETNASSHT ALVKTLRSET DELHEHIRGL EEDKAALVSD
0701: ATVMKQRITV LEDELRNVRK LFQKVEDQNK NLQNQFKVAN RTVDDLSGKI QDVKMDEDVE GAGIFQELPV VSGSEDSRDD LKSVSTEKTK KDVIAVKESE
0801: DGERAQEEKP EIKDSFALSE TASTCFGTEA EDLVTEDEDE ETPNWRHLLP DGMEDREKVL LDEYTSVLRD YREVKRKLGD VEKKNREGFF ELALQLRELK
0901: NAVAYKDVEI QSLRQKLDTT GKDSPHQGEG NNQLEHEQGH HETVSISPTS NFSVATTPHH QVGDVKRTPG RTKSTEVRVK FADVDDSPRT KIPTVEDKVR
1001: ADIDAVLEEN LEFWLRFSTS VHQIQKYQTT VQDLKSELSK LRIESKQQQE SPRSSSNTAV ASEAKPIYRH LREIRTELQL WLENSAVLKD ELQGRYASLA
1101: NIQEEIARVT AQSGGNKVSD SEISGYQAAK FHGEILNMKQ ENKRVSTELH SGLDRVRALK TEVERILSKL EEDLGISSAT EARTTPSKSS SSGRPRIPLR
1201: SFLFGVKLKK NRQQKQSASS LFSCVSPSPG LHKQSSYSRP PGKLPE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)