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AT1G54220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Dihydrolipoamide acetyltransferase, long form protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Dihydrolipoamide acetyltransferase, long form protein; FUNCTIONS IN: dihydrolipoyllysine-residue acetyltransferase activity, acyltransferase activity; INVOLVED IN: pyruvate metabolic process, metabolic process, acetyl-CoA biosynthetic process from pyruvate; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide acetyltransferase, long form (InterPro:IPR006257), E3 binding (InterPro:IPR004167), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide acetyltransferase, long form protein (TAIR:AT3G13930.1); Has 21519 Blast hits to 19723 proteins in 2310 species: Archae - 104; Bacteria - 12081; Metazoa - 737; Fungi - 478; Plants - 377; Viruses - 0; Other Eukaryotes - 7742 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G54220-MONOMERBioCyc:ARA:GQT-1082-MONOMERBioGrid:27088EC:2.3.1.12
eggNOG:COG0508eggNOG:KOG0557EMBL:AC005287EMBL:AY033001
EMBL:AY136410EMBL:BT020419EMBL:CP002684EnsemblPlants:AT1G54220
EnsemblPlants:AT1G54220.1EnsemblPlants:AT1G54220.2entrez:841863Gene3D:3.30.559.10
Gene3D:4.10.320.10GeneID:841863Genevisible:Q5M729GO:GO:0004742
GO:GO:0005739GO:GO:0005759GO:GO:0006096GO:GO:0045254
Gramene:AT1G54220.1Gramene:AT1G54220.2gramene_pathway:2.3.1.12gramene_pathway:PYRUVDEHYD-PWY
hmmpanther:PTHR23151hmmpanther:PTHR23151:SF59HOGENOM:HOG000281566InParanoid:Q5M729
InterPro:IPR000089InterPro:IPR001078InterPro:IPR003016InterPro:IPR004167
InterPro:IPR006257InterPro:IPR011053InterPro:IPR023213iPTMnet:Q5M729
KEGG:00010+2.3.1.12KEGG:00020+2.3.1.12KEGG:00620+2.3.1.12KEGG:ath:AT1G54220
KO:K00627ncoils:CoilOMA:VNEIPHAPaxDb:Q5M729
Pfam:PF00198Pfam:PF00364Pfam:PF02817Pfam:Q5M729
Pfscan:PS50968PhylomeDB:Q5M729PIR:E96583PRIDE:Q5M729
PRO:PR:Q5M729PROSITE:PS00189PROSITE:PS50968ProteinModelPortal:Q5M729
Proteomes:UP000006548Reactome:R-ATH-70268RefSeq:NP_001031186.1RefSeq:NP_564654.1
scanprosite:PS00189SMR:Q5M729STRING:3702.AT1G54220.1SUPFAM:SSF47005
SUPFAM:SSF51230SUPFAM:SSF52777TAIR:AT1G54220TIGRfam:TIGR01349
TIGRFAMs:TIGR01349UniGene:At.19093UniGene:At.21338UniProt:Q5M729
Coordinates (TAIR10) chr1:-:20246460..20250208
Molecular Weight (calculated) 58470.60 Da
IEP (calculated) 7.97
GRAVY (calculated) -0.39
Length 539 amino acids
Sequence (TAIR10)
(BLAST)
001: MAYASRIINH SKKLKDVSTL LRRENAATIR YYSNTNRAPL NREDTFNSRL GYPPLERISI CSTSTLPVSI IFSTTRSNLS SAMGRPIFGK EFSCLMQSAR
101: GFSSGSDLPP HQEIGMPSLS PTMTEGNIAR WLKKEGDKVA PGEVLCEVET DKATVEMECM EEGYLAKIVK AEGSKEIQVG EVIAITVEDE EDIGKFKDYT
201: PSSTADAAPT KAEPTPAPPK EEKVKQPSSP PEPKASKPST PPTGDRVFAS PLARKLAEDN NVPLSDIEGT GPEGRIVKAD IDEYLASSGK GATAKPSKST
301: DSKAPALDYV DIPHSQIRKV TASRLAFSKQ TIPHYYLTVD TCVDKLMALR SQLNSFKEAS GGKRISVNDL VVKAAALALR KVPQCNSSWT DDYIRQFKNV
401: NINVAVQTEN GLYVPVVKDA DRKGLSTIGE EVRLLAQKAK ENSLKPEDYE GGTFTVSNLG GPFGIKQFCA VVNPPQAAIL AVGSAEKRVV PGNGPDQFNF
501: ASYMPVTLSC DHRVVDGAIG AEWLKAFKGY IENPKSMLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)