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AT1G53680.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase TAU 28
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 28 (GSTU28); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6308 Blast hits to 6256 proteins in 1129 species: Archae - 0; Bacteria - 2948; Metazoa - 456; Fungi - 175; Plants - 1987; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G53680-MONOMEREC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406
EMBL:AC024260EMBL:CP002684EnsemblPlants:AT1G53680EnsemblPlants:AT1G53680.1
entrez:841805Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:841805
Genevisible:Q9C8M3GO:GO:0004364GO:GO:0005737GO:GO:0005829
GO:GO:0006749GO:GO:0009407GO:GO:0009636GO:GO:0046686
Gramene:AT1G53680.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF204HOGENOM:HOG000125749
InParanoid:Q9C8M3InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336
KEGG:ath:AT1G53680KO:K00799OMA:WASPYAMPaxDb:Q9C8M3
Pfam:PF02798Pfam:PF13410Pfam:PF13417Pfam:Q9C8M3
Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9C8M3PIR:A96577
PRIDE:Q9C8M3PRO:PR:Q9C8M3PROSITE:PS50404PROSITE:PS50405
ProteinModelPortal:Q9C8M3Proteomes:UP000006548RefSeq:NP_175772.1SMR:Q9C8M3
STRING:3702.AT1G53680.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G53680
tair10-symbols:ATGSTU28tair10-symbols:GSTU28UniGene:At.52184UniProt:Q9C8M3
Coordinates (TAIR10) chr1:+:20038358..20039117
Molecular Weight (calculated) 25592.40 Da
IEP (calculated) 5.07
GRAVY (calculated) -0.42
Length 224 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKENSKVVV LDFWASPYAM RTKVALREKG VEFEVQEEDL WNKSELLLKS NPVHKKVPVL IHNNTPISES LIQVQYIDET WTDAASFLPS DPQSRATARF
101: WADYADKTIS FEGGRKIWGN KKGEEQEKGK KEFLESLKVL EAELGDKSYF GGETFGYVDI TLVPFYSWFY ALEKCGDFSV EAECPKIVAW GKRCVERNSV
201: AATLPESEKV YQQVLKLRQI FGVE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)