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AT1G52590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Putative thiol-disulphide oxidoreductase DCC
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Putative thiol-disulphide oxidoreductase DCC; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); BEST Arabidopsis thaliana protein match is: Putative thiol-disulphide oxidoreductase DCC (TAIR:AT1G24095.1); Has 955 Blast hits to 955 proteins in 365 species: Archae - 5; Bacteria - 640; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink).
Protein Annotations
DNASU:841691eggNOG:COG3011eggNOG:ENOG410IWD0EMBL:AC008016
EMBL:AK117491EMBL:AY088239EMBL:BT005075EMBL:CP002684
EnsemblPlants:AT1G52590EnsemblPlants:AT1G52590.1entrez:841691GeneID:841691
Genevisible:Q9SSR1GO:GO:0010287Gramene:AT1G52590.1hmmpanther:PTHR33639
hmmpanther:PTHR33639:SF2HOGENOM:HOG000029296InParanoid:Q9SSR1InterPro:IPR007263
iPTMnet:Q9SSR1KEGG:ath:AT1G52590OMA:CKLCNGWPaxDb:Q9SSR1
Pfam:PF04134Pfam:Q9SSR1PhylomeDB:Q9SSR1PIR:F96566
PRIDE:Q9SSR1PRO:PR:Q9SSR1Proteomes:UP000006548RefSeq:NP_564611.1
STRING:3702.AT1G52590.1TAIR:AT1G52590UniGene:At.37569UniGene:At.37570
UniProt:Q9SSR1
Coordinates (TAIR10) chr1:-:19589224..19590231
Molecular Weight (calculated) 19709.80 Da
IEP (calculated) 9.56
GRAVY (calculated) -0.17
Length 172 amino acids
Sequence (TAIR10)
(BLAST)
001: MAILIPASFG RLTITSRAQV RVRVSASANQ RTIRRDSVDW VKETSSFFEE DKRPIMLFDG VCNLCNGGVK FVRDHDRNRS IRFEALQSEA GKKLLLRSGR
101: APDDISSVVL VENDRSYIKS EAVLKIMKYI DLPFPQLAFF LQFAPLFVRD FLYENVANNR YAMFGRSDSC EL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)